Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.31■■□□□ 1
NpcdF8VQB8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
NpcdF8VQB8 Mir3081-201ENSMUST00000175305 84 ntBASIC21.31■■□□□ 1
NpcdF8VQB8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.31■■□□□ 1
NpcdF8VQB8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.31■■□□□ 1
NpcdF8VQB8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.31■■□□□ 1
NpcdF8VQB8 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.31■■□□□ 1
NpcdF8VQB8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NpcdF8VQB8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NpcdF8VQB8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NpcdF8VQB8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.3■■□□□ 1
NpcdF8VQB8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
NpcdF8VQB8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NpcdF8VQB8 Gm24589-201ENSMUST00000116692 94 ntBASIC21.3■■□□□ 1
NpcdF8VQB8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.3■■□□□ 1
NpcdF8VQB8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NpcdF8VQB8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
NpcdF8VQB8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
NpcdF8VQB8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NpcdF8VQB8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.29■■□□□ 1
NpcdF8VQB8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NpcdF8VQB8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
NpcdF8VQB8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
NpcdF8VQB8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
NpcdF8VQB8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.29■■□□□ 1
NpcdF8VQB8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.29■■□□□ 1
NpcdF8VQB8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NpcdF8VQB8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.29■■□□□ 1
NpcdF8VQB8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.29■■□□□ 1
NpcdF8VQB8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
NpcdF8VQB8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
NpcdF8VQB8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.29■■□□□ 1
NpcdF8VQB8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.29■■□□□ 1
NpcdF8VQB8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NpcdF8VQB8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
NpcdF8VQB8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
NpcdF8VQB8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.28■■□□□ 1
NpcdF8VQB8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.28■■□□□ 1
NpcdF8VQB8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.28■■□□□ 1
NpcdF8VQB8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.28■■□□□ 1
NpcdF8VQB8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.28■■□□□ 1
NpcdF8VQB8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.28■■□□□ 1
NpcdF8VQB8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC21.28■■□□□ 1
NpcdF8VQB8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NpcdF8VQB8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NpcdF8VQB8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NpcdF8VQB8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.28■■□□□ 1
NpcdF8VQB8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NpcdF8VQB8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.28■■□□□ 1
NpcdF8VQB8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NpcdF8VQB8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
NpcdF8VQB8 Gm4974-201ENSMUST00000209974 875 ntBASIC21.27■■□□□ 1
NpcdF8VQB8 AC164629.2-201ENSMUST00000217916 270 ntBASIC21.27■■□□□ 1
NpcdF8VQB8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NpcdF8VQB8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NpcdF8VQB8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
NpcdF8VQB8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
NpcdF8VQB8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
NpcdF8VQB8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NpcdF8VQB8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
NpcdF8VQB8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.27■■□□□ 1
NpcdF8VQB8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NpcdF8VQB8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NpcdF8VQB8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NpcdF8VQB8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NpcdF8VQB8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NpcdF8VQB8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NpcdF8VQB8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
NpcdF8VQB8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NpcdF8VQB8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NpcdF8VQB8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NpcdF8VQB8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NpcdF8VQB8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NpcdF8VQB8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NpcdF8VQB8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NpcdF8VQB8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NpcdF8VQB8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NpcdF8VQB8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NpcdF8VQB8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NpcdF8VQB8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
NpcdF8VQB8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NpcdF8VQB8 Gm11355-201ENSMUST00000121120 306 ntBASIC21.24■□□□□ 0.99
NpcdF8VQB8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.24■□□□□ 0.99
NpcdF8VQB8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms