Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ccdc149F6V035 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc149F6V035 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc149F6V035 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc149F6V035 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc149F6V035 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.03■□□□□ 0.48
Ccdc149F6V035 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.03■□□□□ 0.48
Ccdc149F6V035 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc149F6V035 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc149F6V035 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc149F6V035 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc149F6V035 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc149F6V035 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc149F6V035 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc149F6V035 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc149F6V035 Gm7889-201ENSMUST00000185591 958 ntBASIC18.02■□□□□ 0.48
Ccdc149F6V035 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.02■□□□□ 0.48
Ccdc149F6V035 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc149F6V035 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc149F6V035 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc149F6V035 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc149F6V035 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc149F6V035 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc149F6V035 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Ccdc149F6V035 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc149F6V035 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc149F6V035 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.01■□□□□ 0.47
Ccdc149F6V035 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc149F6V035 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc149F6V035 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ccdc149F6V035 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc149F6V035 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc149F6V035 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc149F6V035 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc149F6V035 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18■□□□□ 0.47
Ccdc149F6V035 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc149F6V035 Gm38027-201ENSMUST00000192315 235 ntBASIC18■□□□□ 0.47
Ccdc149F6V035 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc149F6V035 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc149F6V035 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc149F6V035 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ccdc149F6V035 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc149F6V035 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Ccdc149F6V035 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc149F6V035 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.99■□□□□ 0.47
Ccdc149F6V035 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ccdc149F6V035 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc149F6V035 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.99■□□□□ 0.47
Ccdc149F6V035 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.99■□□□□ 0.47
Ccdc149F6V035 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc149F6V035 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc149F6V035 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc149F6V035 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc149F6V035 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ccdc149F6V035 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.98■□□□□ 0.47
Ccdc149F6V035 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc149F6V035 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc149F6V035 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Ccdc149F6V035 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.98■□□□□ 0.47
Ccdc149F6V035 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc149F6V035 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc149F6V035 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc149F6V035 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc149F6V035 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc149F6V035 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.98■□□□□ 0.47
Ccdc149F6V035 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms