Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Gm715-201ENSMUST00000117865 831 ntBASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms