Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm10167-201ENSMUST00000150411 1479 ntBASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv1-88A0A140T8N1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm27454-201ENSMUST00000185090 204 ntBASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm43017-201ENSMUST00000198296 752 ntBASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm19094-201ENSMUST00000209791 1246 ntBASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv1-88A0A140T8N1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm5828-201ENSMUST00000071842 1860 ntBASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm9194-201ENSMUST00000220749 1447 ntBASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv1-88A0A140T8N1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms