Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Gm15820-201ENSMUST00000201566 728 ntBASIC13.09□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.09□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.08□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.06□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trdv2-1A0A0G2JGB9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms