Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav9d-4A0A0G2JG37 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-4A0A0G2JG37 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav9d-4A0A0G2JG37 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Spcs1-204ENSMUST00000226782 949 ntBASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-4A0A0G2JG37 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-4A0A0G2JG37 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-4A0A0G2JG37 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-4A0A0G2JG37 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-4A0A0G2JG37 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-4A0A0G2JG37 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-4A0A0G2JG37 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-4A0A0G2JG37 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9d-4A0A0G2JG37 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms