Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Tgds-204ENSMUST00000228543 1594 ntBASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms