Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gm24841-201ENSMUST00000158676 357 ntBASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Mir8112-201ENSMUST00000184382 131 ntBASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gm30025-201ENSMUST00000218555 728 ntBASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gm43799-201ENSMUST00000201845 579 ntBASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.16■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Igkv5-43A0A0B4J1J2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm11539-201ENSMUST00000119837 557 ntBASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm13436-201ENSMUST00000120418 567 ntBASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm13559-201ENSMUST00000120476 863 ntBASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.12■□□□□ 0.49
Igkv5-43A0A0B4J1J2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms