Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.75□□□□□ -0.21
Trav16A0A075B653 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Gm9847-201ENSMUST00000052528 599 ntBASIC13.75□□□□□ -0.21
Trav16A0A075B653 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Tgds-204ENSMUST00000228543 1594 ntBASIC13.75□□□□□ -0.21
Trav16A0A075B653 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.74□□□□□ -0.21
Trav16A0A075B653 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav16A0A075B653 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.73□□□□□ -0.21
Trav16A0A075B653 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav16A0A075B653 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav16A0A075B653 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Trav16A0A075B653 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav16A0A075B653 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav16A0A075B653 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav16A0A075B653 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav16A0A075B653 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms