Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Wdr70-203ENSMUST00000227371 1130 ntBASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-2A0A075B649 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13-2A0A075B649 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13-2A0A075B649 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13-2A0A075B649 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Trav13-2A0A075B649 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13-2A0A075B649 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13-2A0A075B649 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Gm26971-201ENSMUST00000182423 1072 ntBASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Gm19094-201ENSMUST00000209791 1246 ntBASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav13-2A0A075B649 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav13-2A0A075B649 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-2A0A075B649 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Trav13-2A0A075B649 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-2A0A075B649 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav13-2A0A075B649 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-2A0A075B649 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-2A0A075B649 Zkscan3-208ENSMUST00000224820 5398 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms