Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nubp2Q9R061 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nubp2Q9R061 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nubp2Q9R061 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.34■■□□□ 1.01
Nubp2Q9R061 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nubp2Q9R061 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nubp2Q9R061 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nubp2Q9R061 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nubp2Q9R061 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nubp2Q9R061 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Nubp2Q9R061 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nubp2Q9R061 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.32■■□□□ 1
Nubp2Q9R061 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nubp2Q9R061 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Nubp2Q9R061 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nubp2Q9R061 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.31■■□□□ 1
Nubp2Q9R061 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nubp2Q9R061 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nubp2Q9R061 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nubp2Q9R061 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nubp2Q9R061 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nubp2Q9R061 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nubp2Q9R061 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Nubp2Q9R061 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nubp2Q9R061 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nubp2Q9R061 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nubp2Q9R061 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nubp2Q9R061 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Nubp2Q9R061 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nubp2Q9R061 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Nubp2Q9R061 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nubp2Q9R061 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nubp2Q9R061 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nubp2Q9R061 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Nubp2Q9R061 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nubp2Q9R061 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.24■□□□□ 0.99
Nubp2Q9R061 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nubp2Q9R061 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nubp2Q9R061 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.23■□□□□ 0.99
Nubp2Q9R061 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Nubp2Q9R061 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nubp2Q9R061 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nubp2Q9R061 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nubp2Q9R061 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.21■□□□□ 0.99
Nubp2Q9R061 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.21■□□□□ 0.99
Nubp2Q9R061 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nubp2Q9R061 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nubp2Q9R061 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.2■□□□□ 0.98
Nubp2Q9R061 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nubp2Q9R061 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nubp2Q9R061 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Nubp2Q9R061 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nubp2Q9R061 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nubp2Q9R061 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nubp2Q9R061 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nubp2Q9R061 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.17■□□□□ 0.98
Nubp2Q9R061 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nubp2Q9R061 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nubp2Q9R061 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nubp2Q9R061 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nubp2Q9R061 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nubp2Q9R061 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nubp2Q9R061 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nubp2Q9R061 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nubp2Q9R061 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nubp2Q9R061 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Nubp2Q9R061 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.14■□□□□ 0.97
Nubp2Q9R061 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nubp2Q9R061 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nubp2Q9R061 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nubp2Q9R061 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Nubp2Q9R061 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nubp2Q9R061 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nubp2Q9R061 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nubp2Q9R061 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nubp2Q9R061 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.08■□□□□ 0.97
Nubp2Q9R061 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.08■□□□□ 0.97
Nubp2Q9R061 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nubp2Q9R061 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nubp2Q9R061 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nubp2Q9R061 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Nubp2Q9R061 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nubp2Q9R061 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.06■□□□□ 0.96
Nubp2Q9R061 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Nubp2Q9R061 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nubp2Q9R061 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Nubp2Q9R061 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nubp2Q9R061 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nubp2Q9R061 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.04■□□□□ 0.96
Nubp2Q9R061 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nubp2Q9R061 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nubp2Q9R061 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nubp2Q9R061 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nubp2Q9R061 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.03■□□□□ 0.96
Nubp2Q9R061 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nubp2Q9R061 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Nubp2Q9R061 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Nubp2Q9R061 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nubp2Q9R061 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nubp2Q9R061 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms