Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Nubp1Q9R060 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nubp1Q9R060 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.22■□□□□ 0.99
Nubp1Q9R060 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.2■□□□□ 0.98
Nubp1Q9R060 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nubp1Q9R060 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nubp1Q9R060 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Nubp1Q9R060 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nubp1Q9R060 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nubp1Q9R060 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nubp1Q9R060 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.15■□□□□ 0.98
Nubp1Q9R060 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.15■□□□□ 0.98
Nubp1Q9R060 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nubp1Q9R060 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.14■□□□□ 0.97
Nubp1Q9R060 Gm6311-201ENSMUST00000073790 878 ntBASIC21.14■□□□□ 0.97
Nubp1Q9R060 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nubp1Q9R060 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nubp1Q9R060 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nubp1Q9R060 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nubp1Q9R060 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Nubp1Q9R060 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nubp1Q9R060 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Nubp1Q9R060 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Nubp1Q9R060 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nubp1Q9R060 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nubp1Q9R060 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nubp1Q9R060 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.09■□□□□ 0.97
Nubp1Q9R060 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Nubp1Q9R060 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nubp1Q9R060 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.08■□□□□ 0.97
Nubp1Q9R060 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.08■□□□□ 0.97
Nubp1Q9R060 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Nubp1Q9R060 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nubp1Q9R060 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nubp1Q9R060 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nubp1Q9R060 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nubp1Q9R060 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nubp1Q9R060 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nubp1Q9R060 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.04■□□□□ 0.96
Nubp1Q9R060 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nubp1Q9R060 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.03■□□□□ 0.96
Nubp1Q9R060 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nubp1Q9R060 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.03■□□□□ 0.96
Nubp1Q9R060 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nubp1Q9R060 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nubp1Q9R060 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.02■□□□□ 0.96
Nubp1Q9R060 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.02■□□□□ 0.96
Nubp1Q9R060 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.02■□□□□ 0.96
Nubp1Q9R060 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nubp1Q9R060 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nubp1Q9R060 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nubp1Q9R060 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.01■□□□□ 0.95
Nubp1Q9R060 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nubp1Q9R060 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nubp1Q9R060 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nubp1Q9R060 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nubp1Q9R060 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nubp1Q9R060 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nubp1Q9R060 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nubp1Q9R060 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.97■□□□□ 0.95
Nubp1Q9R060 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Nubp1Q9R060 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nubp1Q9R060 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.94■□□□□ 0.94
Nubp1Q9R060 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nubp1Q9R060 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nubp1Q9R060 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nubp1Q9R060 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nubp1Q9R060 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nubp1Q9R060 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.93■□□□□ 0.94
Nubp1Q9R060 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nubp1Q9R060 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nubp1Q9R060 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nubp1Q9R060 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nubp1Q9R060 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nubp1Q9R060 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.92■□□□□ 0.94
Nubp1Q9R060 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nubp1Q9R060 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nubp1Q9R060 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nubp1Q9R060 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nubp1Q9R060 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nubp1Q9R060 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.91■□□□□ 0.94
Nubp1Q9R060 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nubp1Q9R060 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Nubp1Q9R060 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nubp1Q9R060 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.9■□□□□ 0.94
Nubp1Q9R060 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.9■□□□□ 0.94
Nubp1Q9R060 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nubp1Q9R060 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nubp1Q9R060 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nubp1Q9R060 Gm15039-201ENSMUST00000118914 875 ntBASIC20.88■□□□□ 0.93
Nubp1Q9R060 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nubp1Q9R060 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.87■□□□□ 0.93
Nubp1Q9R060 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Nubp1Q9R060 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nubp1Q9R060 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nubp1Q9R060 Particl-201ENSMUST00000205370 1560 ntBASIC20.85■□□□□ 0.93
Nubp1Q9R060 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nubp1Q9R060 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nubp1Q9R060 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nubp1Q9R060 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms