Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cml3Q9JIY8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cml3Q9JIY8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cml3Q9JIY8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cml3Q9JIY8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cml3Q9JIY8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cml3Q9JIY8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cml3Q9JIY8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cml3Q9JIY8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cml3Q9JIY8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cml3Q9JIY8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cml3Q9JIY8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cml3Q9JIY8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cml3Q9JIY8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cml3Q9JIY8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cml3Q9JIY8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cml3Q9JIY8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cml3Q9JIY8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cml3Q9JIY8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cml3Q9JIY8 Peli2-204ENSMUST00000226513 1320 ntBASIC18.33■□□□□ 0.53
Cml3Q9JIY8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cml3Q9JIY8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cml3Q9JIY8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cml3Q9JIY8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cml3Q9JIY8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cml3Q9JIY8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Cml3Q9JIY8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cml3Q9JIY8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cml3Q9JIY8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cml3Q9JIY8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cml3Q9JIY8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cml3Q9JIY8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cml3Q9JIY8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cml3Q9JIY8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cml3Q9JIY8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cml3Q9JIY8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cml3Q9JIY8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cml3Q9JIY8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cml3Q9JIY8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cml3Q9JIY8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.28■□□□□ 0.52
Cml3Q9JIY8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cml3Q9JIY8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cml3Q9JIY8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cml3Q9JIY8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cml3Q9JIY8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cml3Q9JIY8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cml3Q9JIY8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cml3Q9JIY8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cml3Q9JIY8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cml3Q9JIY8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cml3Q9JIY8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cml3Q9JIY8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cml3Q9JIY8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.23■□□□□ 0.51
Cml3Q9JIY8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cml3Q9JIY8 Gm26115-201ENSMUST00000175605 87 ntBASIC18.23■□□□□ 0.51
Cml3Q9JIY8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cml3Q9JIY8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cml3Q9JIY8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cml3Q9JIY8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cml3Q9JIY8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cml3Q9JIY8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cml3Q9JIY8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cml3Q9JIY8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cml3Q9JIY8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cml3Q9JIY8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cml3Q9JIY8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cml3Q9JIY8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.21■□□□□ 0.5
Cml3Q9JIY8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cml3Q9JIY8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cml3Q9JIY8 Gm8109-201ENSMUST00000194076 746 ntBASIC18.2■□□□□ 0.5
Cml3Q9JIY8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cml3Q9JIY8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cml3Q9JIY8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cml3Q9JIY8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Cml3Q9JIY8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cml3Q9JIY8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cml3Q9JIY8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cml3Q9JIY8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.19■□□□□ 0.5
Cml3Q9JIY8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cml3Q9JIY8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cml3Q9JIY8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cml3Q9JIY8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cml3Q9JIY8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cml3Q9JIY8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Cml3Q9JIY8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cml3Q9JIY8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Cml3Q9JIY8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cml3Q9JIY8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cml3Q9JIY8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cml3Q9JIY8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Cml3Q9JIY8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cml3Q9JIY8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cml3Q9JIY8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cml3Q9JIY8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cml3Q9JIY8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cml3Q9JIY8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cml3Q9JIY8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cml3Q9JIY8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cml3Q9JIY8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cml3Q9JIY8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms