Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ndufa11Q9D8B4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.69■■□□□ 1.06
Ndufa11Q9D8B4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.69■■□□□ 1.06
Ndufa11Q9D8B4 Gm11175-201ENSMUST00000116172 543 ntBASIC21.68■■□□□ 1.06
Ndufa11Q9D8B4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.68■■□□□ 1.06
Ndufa11Q9D8B4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ndufa11Q9D8B4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ndufa11Q9D8B4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ndufa11Q9D8B4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ndufa11Q9D8B4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ndufa11Q9D8B4 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.64■■□□□ 1.05
Ndufa11Q9D8B4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ndufa11Q9D8B4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ndufa11Q9D8B4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ndufa11Q9D8B4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.61■■□□□ 1.05
Ndufa11Q9D8B4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ndufa11Q9D8B4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ndufa11Q9D8B4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ndufa11Q9D8B4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ndufa11Q9D8B4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ndufa11Q9D8B4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ndufa11Q9D8B4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ndufa11Q9D8B4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Ndufa11Q9D8B4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ndufa11Q9D8B4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.54■■□□□ 1.04
Ndufa11Q9D8B4 Cap2-205ENSMUST00000225824 1634 ntBASIC21.54■■□□□ 1.04
Ndufa11Q9D8B4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.53■■□□□ 1.04
Ndufa11Q9D8B4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ndufa11Q9D8B4 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.52■■□□□ 1.04
Ndufa11Q9D8B4 Gm6311-201ENSMUST00000073790 878 ntBASIC21.52■■□□□ 1.04
Ndufa11Q9D8B4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ndufa11Q9D8B4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ndufa11Q9D8B4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ndufa11Q9D8B4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ndufa11Q9D8B4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ndufa11Q9D8B4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ndufa11Q9D8B4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ndufa11Q9D8B4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ndufa11Q9D8B4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ndufa11Q9D8B4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.49■■□□□ 1.03
Ndufa11Q9D8B4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.49■■□□□ 1.03
Ndufa11Q9D8B4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Ndufa11Q9D8B4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ndufa11Q9D8B4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ndufa11Q9D8B4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ndufa11Q9D8B4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ndufa11Q9D8B4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ndufa11Q9D8B4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.46■■□□□ 1.03
Ndufa11Q9D8B4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.46■■□□□ 1.03
Ndufa11Q9D8B4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ndufa11Q9D8B4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ndufa11Q9D8B4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ndufa11Q9D8B4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ndufa11Q9D8B4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ndufa11Q9D8B4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ndufa11Q9D8B4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ndufa11Q9D8B4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ndufa11Q9D8B4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.42■■□□□ 1.02
Ndufa11Q9D8B4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.42■■□□□ 1.02
Ndufa11Q9D8B4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ndufa11Q9D8B4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Ndufa11Q9D8B4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Ndufa11Q9D8B4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ndufa11Q9D8B4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.39■■□□□ 1.01
Ndufa11Q9D8B4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Ndufa11Q9D8B4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.38■■□□□ 1.01
Ndufa11Q9D8B4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.38■■□□□ 1.01
Ndufa11Q9D8B4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ndufa11Q9D8B4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ndufa11Q9D8B4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ndufa11Q9D8B4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ndufa11Q9D8B4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ndufa11Q9D8B4 Particl-201ENSMUST00000205370 1560 ntBASIC21.36■■□□□ 1.01
Ndufa11Q9D8B4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.36■■□□□ 1.01
Ndufa11Q9D8B4 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.36■■□□□ 1.01
Ndufa11Q9D8B4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.35■■□□□ 1.01
Ndufa11Q9D8B4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ndufa11Q9D8B4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ndufa11Q9D8B4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Ndufa11Q9D8B4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ndufa11Q9D8B4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ndufa11Q9D8B4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ndufa11Q9D8B4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ndufa11Q9D8B4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndufa11Q9D8B4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ndufa11Q9D8B4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ndufa11Q9D8B4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ndufa11Q9D8B4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ndufa11Q9D8B4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.31■■□□□ 1
Ndufa11Q9D8B4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ndufa11Q9D8B4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.29■■□□□ 1
Ndufa11Q9D8B4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ndufa11Q9D8B4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ndufa11Q9D8B4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ndufa11Q9D8B4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ndufa11Q9D8B4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ndufa11Q9D8B4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ndufa11Q9D8B4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ndufa11Q9D8B4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ndufa11Q9D8B4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms