Protein–RNA interactions for Protein: Q9D6C3

3830403N18Rik, MCG113545, isoform CRA_a, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3830403N18RikQ9D6C3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
3830403N18RikQ9D6C3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
3830403N18RikQ9D6C3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
3830403N18RikQ9D6C3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
3830403N18RikQ9D6C3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
3830403N18RikQ9D6C3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
3830403N18RikQ9D6C3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
3830403N18RikQ9D6C3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
3830403N18RikQ9D6C3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
3830403N18RikQ9D6C3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.57■■□□□ 1.68
3830403N18RikQ9D6C3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
3830403N18RikQ9D6C3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
3830403N18RikQ9D6C3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
3830403N18RikQ9D6C3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
3830403N18RikQ9D6C3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
3830403N18RikQ9D6C3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
3830403N18RikQ9D6C3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
3830403N18RikQ9D6C3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
3830403N18RikQ9D6C3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
3830403N18RikQ9D6C3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.52■■□□□ 1.68
3830403N18RikQ9D6C3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
3830403N18RikQ9D6C3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
3830403N18RikQ9D6C3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
3830403N18RikQ9D6C3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
3830403N18RikQ9D6C3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
3830403N18RikQ9D6C3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
3830403N18RikQ9D6C3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
3830403N18RikQ9D6C3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.49■■□□□ 1.67
3830403N18RikQ9D6C3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
3830403N18RikQ9D6C3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
3830403N18RikQ9D6C3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
3830403N18RikQ9D6C3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
3830403N18RikQ9D6C3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
3830403N18RikQ9D6C3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
3830403N18RikQ9D6C3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.46■■□□□ 1.67
3830403N18RikQ9D6C3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
3830403N18RikQ9D6C3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
3830403N18RikQ9D6C3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
3830403N18RikQ9D6C3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
3830403N18RikQ9D6C3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
3830403N18RikQ9D6C3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
3830403N18RikQ9D6C3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
3830403N18RikQ9D6C3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
3830403N18RikQ9D6C3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.42■■□□□ 1.66
3830403N18RikQ9D6C3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
3830403N18RikQ9D6C3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
3830403N18RikQ9D6C3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
3830403N18RikQ9D6C3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
3830403N18RikQ9D6C3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
3830403N18RikQ9D6C3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
3830403N18RikQ9D6C3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
3830403N18RikQ9D6C3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
3830403N18RikQ9D6C3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
3830403N18RikQ9D6C3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
3830403N18RikQ9D6C3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
3830403N18RikQ9D6C3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
3830403N18RikQ9D6C3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
3830403N18RikQ9D6C3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
3830403N18RikQ9D6C3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
3830403N18RikQ9D6C3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
3830403N18RikQ9D6C3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
3830403N18RikQ9D6C3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
3830403N18RikQ9D6C3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
3830403N18RikQ9D6C3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
3830403N18RikQ9D6C3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
3830403N18RikQ9D6C3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
3830403N18RikQ9D6C3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
3830403N18RikQ9D6C3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
3830403N18RikQ9D6C3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
3830403N18RikQ9D6C3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
3830403N18RikQ9D6C3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
3830403N18RikQ9D6C3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.3■■□□□ 1.64
3830403N18RikQ9D6C3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
3830403N18RikQ9D6C3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
3830403N18RikQ9D6C3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
3830403N18RikQ9D6C3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
3830403N18RikQ9D6C3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
3830403N18RikQ9D6C3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
3830403N18RikQ9D6C3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.26■■□□□ 1.63
3830403N18RikQ9D6C3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.26■■□□□ 1.63
3830403N18RikQ9D6C3 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.26■■□□□ 1.63
3830403N18RikQ9D6C3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
3830403N18RikQ9D6C3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
3830403N18RikQ9D6C3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.24■■□□□ 1.63
3830403N18RikQ9D6C3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
3830403N18RikQ9D6C3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.23■■□□□ 1.63
3830403N18RikQ9D6C3 Zfp131-205ENSMUST00000223812 663 ntBASIC25.23■■□□□ 1.63
3830403N18RikQ9D6C3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
3830403N18RikQ9D6C3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
3830403N18RikQ9D6C3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
3830403N18RikQ9D6C3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
3830403N18RikQ9D6C3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
3830403N18RikQ9D6C3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
3830403N18RikQ9D6C3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
3830403N18RikQ9D6C3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
3830403N18RikQ9D6C3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
3830403N18RikQ9D6C3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.18■■□□□ 1.62
3830403N18RikQ9D6C3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
3830403N18RikQ9D6C3 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.17■■□□□ 1.62
3830403N18RikQ9D6C3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms