Protein–RNA interactions for Protein: Q9CYZ8

Ssbp2, Single-stranded DNA-binding protein 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp2Q9CYZ8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssbp2Q9CYZ8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssbp2Q9CYZ8 Gm9397-201ENSMUST00000200125 605 ntBASIC19.44■□□□□ 0.7
Ssbp2Q9CYZ8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ssbp2Q9CYZ8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssbp2Q9CYZ8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssbp2Q9CYZ8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.42■□□□□ 0.7
Ssbp2Q9CYZ8 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.42■□□□□ 0.7
Ssbp2Q9CYZ8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ssbp2Q9CYZ8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssbp2Q9CYZ8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.41■□□□□ 0.7
Ssbp2Q9CYZ8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Ssbp2Q9CYZ8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssbp2Q9CYZ8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.4■□□□□ 0.7
Ssbp2Q9CYZ8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssbp2Q9CYZ8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.4■□□□□ 0.7
Ssbp2Q9CYZ8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssbp2Q9CYZ8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.39■□□□□ 0.7
Ssbp2Q9CYZ8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.39■□□□□ 0.69
Ssbp2Q9CYZ8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ssbp2Q9CYZ8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssbp2Q9CYZ8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ssbp2Q9CYZ8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ssbp2Q9CYZ8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ssbp2Q9CYZ8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Ssbp2Q9CYZ8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.38■□□□□ 0.69
Ssbp2Q9CYZ8 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.38■□□□□ 0.69
Ssbp2Q9CYZ8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssbp2Q9CYZ8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ssbp2Q9CYZ8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ssbp2Q9CYZ8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ssbp2Q9CYZ8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssbp2Q9CYZ8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.36■□□□□ 0.69
Ssbp2Q9CYZ8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssbp2Q9CYZ8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssbp2Q9CYZ8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.36■□□□□ 0.69
Ssbp2Q9CYZ8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ssbp2Q9CYZ8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssbp2Q9CYZ8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssbp2Q9CYZ8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ssbp2Q9CYZ8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ssbp2Q9CYZ8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ssbp2Q9CYZ8 Gm24970-201ENSMUST00000175582 82 ntBASIC19.33■□□□□ 0.68
Ssbp2Q9CYZ8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ssbp2Q9CYZ8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.32■□□□□ 0.68
Ssbp2Q9CYZ8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.32■□□□□ 0.68
Ssbp2Q9CYZ8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssbp2Q9CYZ8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ssbp2Q9CYZ8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ssbp2Q9CYZ8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssbp2Q9CYZ8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssbp2Q9CYZ8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssbp2Q9CYZ8 Gm45855-201ENSMUST00000212546 880 ntBASIC19.3■□□□□ 0.68
Ssbp2Q9CYZ8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssbp2Q9CYZ8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssbp2Q9CYZ8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssbp2Q9CYZ8 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.28■□□□□ 0.68
Ssbp2Q9CYZ8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssbp2Q9CYZ8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssbp2Q9CYZ8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ssbp2Q9CYZ8 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.26■□□□□ 0.67
Ssbp2Q9CYZ8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssbp2Q9CYZ8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssbp2Q9CYZ8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssbp2Q9CYZ8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssbp2Q9CYZ8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssbp2Q9CYZ8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ssbp2Q9CYZ8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ssbp2Q9CYZ8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Ssbp2Q9CYZ8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssbp2Q9CYZ8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.23■□□□□ 0.67
Ssbp2Q9CYZ8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssbp2Q9CYZ8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssbp2Q9CYZ8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssbp2Q9CYZ8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssbp2Q9CYZ8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssbp2Q9CYZ8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ssbp2Q9CYZ8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssbp2Q9CYZ8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssbp2Q9CYZ8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssbp2Q9CYZ8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ssbp2Q9CYZ8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssbp2Q9CYZ8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ssbp2Q9CYZ8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssbp2Q9CYZ8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ssbp2Q9CYZ8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Ssbp2Q9CYZ8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssbp2Q9CYZ8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssbp2Q9CYZ8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.18■□□□□ 0.66
Ssbp2Q9CYZ8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssbp2Q9CYZ8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssbp2Q9CYZ8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssbp2Q9CYZ8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssbp2Q9CYZ8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssbp2Q9CYZ8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssbp2Q9CYZ8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssbp2Q9CYZ8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssbp2Q9CYZ8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.14■□□□□ 0.66
Ssbp2Q9CYZ8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Ssbp2Q9CYZ8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms