Protein–RNA interactions for Protein: Q9CQJ4

Rnf2, E3 ubiquitin-protein ligase RING2, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf2Q9CQJ4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf2Q9CQJ4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Rnf2Q9CQJ4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf2Q9CQJ4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.2■□□□□ 0.66
Rnf2Q9CQJ4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf2Q9CQJ4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf2Q9CQJ4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf2Q9CQJ4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf2Q9CQJ4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf2Q9CQJ4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.18■□□□□ 0.66
Rnf2Q9CQJ4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf2Q9CQJ4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf2Q9CQJ4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf2Q9CQJ4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf2Q9CQJ4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf2Q9CQJ4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf2Q9CQJ4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf2Q9CQJ4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf2Q9CQJ4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rnf2Q9CQJ4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf2Q9CQJ4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf2Q9CQJ4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rnf2Q9CQJ4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
Rnf2Q9CQJ4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rnf2Q9CQJ4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf2Q9CQJ4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf2Q9CQJ4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf2Q9CQJ4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.13■□□□□ 0.65
Rnf2Q9CQJ4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf2Q9CQJ4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rnf2Q9CQJ4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.12■□□□□ 0.65
Rnf2Q9CQJ4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf2Q9CQJ4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf2Q9CQJ4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf2Q9CQJ4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf2Q9CQJ4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf2Q9CQJ4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf2Q9CQJ4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf2Q9CQJ4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf2Q9CQJ4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf2Q9CQJ4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf2Q9CQJ4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf2Q9CQJ4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf2Q9CQJ4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf2Q9CQJ4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.07■□□□□ 0.64
Rnf2Q9CQJ4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rnf2Q9CQJ4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf2Q9CQJ4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf2Q9CQJ4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf2Q9CQJ4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Rnf2Q9CQJ4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf2Q9CQJ4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Rnf2Q9CQJ4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf2Q9CQJ4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf2Q9CQJ4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf2Q9CQJ4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rnf2Q9CQJ4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rnf2Q9CQJ4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf2Q9CQJ4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf2Q9CQJ4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf2Q9CQJ4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf2Q9CQJ4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf2Q9CQJ4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.02■□□□□ 0.64
Rnf2Q9CQJ4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf2Q9CQJ4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf2Q9CQJ4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rnf2Q9CQJ4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rnf2Q9CQJ4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf2Q9CQJ4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf2Q9CQJ4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf2Q9CQJ4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rnf2Q9CQJ4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rnf2Q9CQJ4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf2Q9CQJ4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rnf2Q9CQJ4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf2Q9CQJ4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf2Q9CQJ4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Rnf2Q9CQJ4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf2Q9CQJ4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.98■□□□□ 0.63
Rnf2Q9CQJ4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf2Q9CQJ4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.97■□□□□ 0.63
Rnf2Q9CQJ4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf2Q9CQJ4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf2Q9CQJ4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf2Q9CQJ4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf2Q9CQJ4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf2Q9CQJ4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rnf2Q9CQJ4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf2Q9CQJ4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf2Q9CQJ4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf2Q9CQJ4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf2Q9CQJ4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf2Q9CQJ4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf2Q9CQJ4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf2Q9CQJ4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf2Q9CQJ4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf2Q9CQJ4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rnf2Q9CQJ4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf2Q9CQJ4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf2Q9CQJ4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms