Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rnf111Q99ML9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rnf111Q99ML9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rnf111Q99ML9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf111Q99ML9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Rnf111Q99ML9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf111Q99ML9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rnf111Q99ML9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rnf111Q99ML9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
Rnf111Q99ML9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Rnf111Q99ML9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf111Q99ML9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf111Q99ML9 Zfp131-205ENSMUST00000223812 663 ntBASIC23.5■■□□□ 1.35
Rnf111Q99ML9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf111Q99ML9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf111Q99ML9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.48■■□□□ 1.35
Rnf111Q99ML9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rnf111Q99ML9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rnf111Q99ML9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rnf111Q99ML9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.47■■□□□ 1.35
Rnf111Q99ML9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.35
Rnf111Q99ML9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rnf111Q99ML9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rnf111Q99ML9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rnf111Q99ML9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf111Q99ML9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf111Q99ML9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf111Q99ML9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.44■■□□□ 1.34
Rnf111Q99ML9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Rnf111Q99ML9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rnf111Q99ML9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rnf111Q99ML9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rnf111Q99ML9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Rnf111Q99ML9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf111Q99ML9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf111Q99ML9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Rnf111Q99ML9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf111Q99ML9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rnf111Q99ML9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.39■■□□□ 1.33
Rnf111Q99ML9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rnf111Q99ML9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.38■■□□□ 1.33
Rnf111Q99ML9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf111Q99ML9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Rnf111Q99ML9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf111Q99ML9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf111Q99ML9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf111Q99ML9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.35■■□□□ 1.33
Rnf111Q99ML9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.35■■□□□ 1.33
Rnf111Q99ML9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.35■■□□□ 1.33
Rnf111Q99ML9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf111Q99ML9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf111Q99ML9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf111Q99ML9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf111Q99ML9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rnf111Q99ML9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
Rnf111Q99ML9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
Rnf111Q99ML9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf111Q99ML9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf111Q99ML9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf111Q99ML9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Rnf111Q99ML9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf111Q99ML9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Rnf111Q99ML9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf111Q99ML9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf111Q99ML9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf111Q99ML9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf111Q99ML9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf111Q99ML9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Rnf111Q99ML9 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.26■■□□□ 1.31
Rnf111Q99ML9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf111Q99ML9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf111Q99ML9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Rnf111Q99ML9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf111Q99ML9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf111Q99ML9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf111Q99ML9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.23■■□□□ 1.31
Rnf111Q99ML9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf111Q99ML9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.23■■□□□ 1.31
Rnf111Q99ML9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf111Q99ML9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf111Q99ML9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Rnf111Q99ML9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
Rnf111Q99ML9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf111Q99ML9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf111Q99ML9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Rnf111Q99ML9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf111Q99ML9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf111Q99ML9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
Rnf111Q99ML9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Rnf111Q99ML9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf111Q99ML9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.19■■□□□ 1.3
Rnf111Q99ML9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf111Q99ML9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf111Q99ML9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
Rnf111Q99ML9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
Rnf111Q99ML9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf111Q99ML9 Gm9397-201ENSMUST00000200125 605 ntBASIC23.16■■□□□ 1.3
Rnf111Q99ML9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf111Q99ML9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf111Q99ML9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms