Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Smtnl1Q99LM3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Smtnl1Q99LM3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
Smtnl1Q99LM3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Smtnl1Q99LM3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Smtnl1Q99LM3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Smtnl1Q99LM3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Smtnl1Q99LM3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Smtnl1Q99LM3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Smtnl1Q99LM3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Smtnl1Q99LM3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Smtnl1Q99LM3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Smtnl1Q99LM3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.57■■□□□ 1.84
Smtnl1Q99LM3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Smtnl1Q99LM3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.55■■□□□ 1.84
Smtnl1Q99LM3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Smtnl1Q99LM3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Smtnl1Q99LM3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Smtnl1Q99LM3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Smtnl1Q99LM3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Smtnl1Q99LM3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Smtnl1Q99LM3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.52■■□□□ 1.84
Smtnl1Q99LM3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Smtnl1Q99LM3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.51■■□□□ 1.83
Smtnl1Q99LM3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Smtnl1Q99LM3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Smtnl1Q99LM3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Smtnl1Q99LM3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Smtnl1Q99LM3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.48■■□□□ 1.83
Smtnl1Q99LM3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Smtnl1Q99LM3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Smtnl1Q99LM3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Smtnl1Q99LM3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Smtnl1Q99LM3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Smtnl1Q99LM3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Smtnl1Q99LM3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Smtnl1Q99LM3 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.42■■□□□ 1.82
Smtnl1Q99LM3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Smtnl1Q99LM3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Smtnl1Q99LM3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Smtnl1Q99LM3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Smtnl1Q99LM3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Smtnl1Q99LM3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Smtnl1Q99LM3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Smtnl1Q99LM3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Smtnl1Q99LM3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smtnl1Q99LM3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Smtnl1Q99LM3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Smtnl1Q99LM3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Smtnl1Q99LM3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smtnl1Q99LM3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Smtnl1Q99LM3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smtnl1Q99LM3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.31■■□□□ 1.8
Smtnl1Q99LM3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.31■■□□□ 1.8
Smtnl1Q99LM3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Smtnl1Q99LM3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Smtnl1Q99LM3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Smtnl1Q99LM3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Smtnl1Q99LM3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Smtnl1Q99LM3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smtnl1Q99LM3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Smtnl1Q99LM3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.27■■□□□ 1.8
Smtnl1Q99LM3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Smtnl1Q99LM3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Smtnl1Q99LM3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smtnl1Q99LM3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smtnl1Q99LM3 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.26■■□□□ 1.79
Smtnl1Q99LM3 Zfp131-205ENSMUST00000223812 663 ntBASIC26.26■■□□□ 1.79
Smtnl1Q99LM3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Smtnl1Q99LM3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Smtnl1Q99LM3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smtnl1Q99LM3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Smtnl1Q99LM3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smtnl1Q99LM3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Smtnl1Q99LM3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Smtnl1Q99LM3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Smtnl1Q99LM3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Smtnl1Q99LM3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Smtnl1Q99LM3 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.2■■□□□ 1.78
Smtnl1Q99LM3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.19■■□□□ 1.78
Smtnl1Q99LM3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.18■■□□□ 1.78
Smtnl1Q99LM3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Smtnl1Q99LM3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
Smtnl1Q99LM3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Smtnl1Q99LM3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Smtnl1Q99LM3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Smtnl1Q99LM3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.17■■□□□ 1.78
Smtnl1Q99LM3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.17■■□□□ 1.78
Smtnl1Q99LM3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smtnl1Q99LM3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.15■■□□□ 1.78
Smtnl1Q99LM3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Smtnl1Q99LM3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Smtnl1Q99LM3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Smtnl1Q99LM3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Smtnl1Q99LM3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
Smtnl1Q99LM3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Smtnl1Q99LM3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Smtnl1Q99LM3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Smtnl1Q99LM3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Smtnl1Q99LM3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.11■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms