Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.05■■□□□ 1.44
Pcdhb4Q91XZ6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhb4Q91XZ6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhb4Q91XZ6 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.03■■□□□ 1.44
Pcdhb4Q91XZ6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhb4Q91XZ6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.02■■□□□ 1.44
Pcdhb4Q91XZ6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhb4Q91XZ6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.01■■□□□ 1.43
Pcdhb4Q91XZ6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhb4Q91XZ6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhb4Q91XZ6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhb4Q91XZ6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcdhb4Q91XZ6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhb4Q91XZ6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.99■■□□□ 1.43
Pcdhb4Q91XZ6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhb4Q91XZ6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhb4Q91XZ6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhb4Q91XZ6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhb4Q91XZ6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Pcdhb4Q91XZ6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhb4Q91XZ6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhb4Q91XZ6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.97■■□□□ 1.43
Pcdhb4Q91XZ6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Pcdhb4Q91XZ6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhb4Q91XZ6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhb4Q91XZ6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhb4Q91XZ6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhb4Q91XZ6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.96■■□□□ 1.43
Pcdhb4Q91XZ6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhb4Q91XZ6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhb4Q91XZ6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Pcdhb4Q91XZ6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhb4Q91XZ6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhb4Q91XZ6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhb4Q91XZ6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.91■■□□□ 1.42
Pcdhb4Q91XZ6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhb4Q91XZ6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdhb4Q91XZ6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdhb4Q91XZ6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhb4Q91XZ6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhb4Q91XZ6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhb4Q91XZ6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb4Q91XZ6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb4Q91XZ6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb4Q91XZ6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb4Q91XZ6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Pcdhb4Q91XZ6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb4Q91XZ6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb4Q91XZ6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb4Q91XZ6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb4Q91XZ6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb4Q91XZ6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb4Q91XZ6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb4Q91XZ6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.83■■□□□ 1.41
Pcdhb4Q91XZ6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhb4Q91XZ6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhb4Q91XZ6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Pcdhb4Q91XZ6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Pcdhb4Q91XZ6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Pcdhb4Q91XZ6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb4Q91XZ6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb4Q91XZ6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb4Q91XZ6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.8■■□□□ 1.4
Pcdhb4Q91XZ6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb4Q91XZ6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb4Q91XZ6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.77■■□□□ 1.4
Pcdhb4Q91XZ6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb4Q91XZ6 Zfp131-205ENSMUST00000223812 663 ntBASIC23.76■■□□□ 1.39
Pcdhb4Q91XZ6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb4Q91XZ6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb4Q91XZ6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb4Q91XZ6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb4Q91XZ6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb4Q91XZ6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb4Q91XZ6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb4Q91XZ6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb4Q91XZ6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb4Q91XZ6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.73■■□□□ 1.39
Pcdhb4Q91XZ6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb4Q91XZ6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb4Q91XZ6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb4Q91XZ6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.71■■□□□ 1.39
Pcdhb4Q91XZ6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Pcdhb4Q91XZ6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb4Q91XZ6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcdhb4Q91XZ6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb4Q91XZ6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Pcdhb4Q91XZ6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb4Q91XZ6 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.67■■□□□ 1.38
Pcdhb4Q91XZ6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb4Q91XZ6 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.67■■□□□ 1.38
Pcdhb4Q91XZ6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb4Q91XZ6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb4Q91XZ6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb4Q91XZ6 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.65■■□□□ 1.38
Pcdhb4Q91XZ6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Pcdhb4Q91XZ6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Pcdhb4Q91XZ6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb4Q91XZ6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb4Q91XZ6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 237.3 ms