Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Pcdhgb2Q91XX7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgb2Q91XX7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgb2Q91XX7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Pcdhgb2Q91XX7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgb2Q91XX7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgb2Q91XX7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgb2Q91XX7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhgb2Q91XX7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgb2Q91XX7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgb2Q91XX7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgb2Q91XX7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgb2Q91XX7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.68■■□□□ 1.22
Pcdhgb2Q91XX7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
Pcdhgb2Q91XX7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgb2Q91XX7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgb2Q91XX7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhgb2Q91XX7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.65■■□□□ 1.22
Pcdhgb2Q91XX7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Pcdhgb2Q91XX7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Pcdhgb2Q91XX7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhgb2Q91XX7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgb2Q91XX7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgb2Q91XX7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhgb2Q91XX7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhgb2Q91XX7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Pcdhgb2Q91XX7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgb2Q91XX7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgb2Q91XX7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Pcdhgb2Q91XX7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb2Q91XX7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb2Q91XX7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb2Q91XX7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb2Q91XX7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgb2Q91XX7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhgb2Q91XX7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhgb2Q91XX7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhgb2Q91XX7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhgb2Q91XX7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgb2Q91XX7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgb2Q91XX7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgb2Q91XX7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhgb2Q91XX7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.56■■□□□ 1.2
Pcdhgb2Q91XX7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhgb2Q91XX7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Pcdhgb2Q91XX7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgb2Q91XX7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.55■■□□□ 1.2
Pcdhgb2Q91XX7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb2Q91XX7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb2Q91XX7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.54■■□□□ 1.2
Pcdhgb2Q91XX7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb2Q91XX7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb2Q91XX7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Pcdhgb2Q91XX7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb2Q91XX7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb2Q91XX7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb2Q91XX7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgb2Q91XX7 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.51■■□□□ 1.19
Pcdhgb2Q91XX7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgb2Q91XX7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Pcdhgb2Q91XX7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgb2Q91XX7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgb2Q91XX7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgb2Q91XX7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgb2Q91XX7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgb2Q91XX7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Pcdhgb2Q91XX7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhgb2Q91XX7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.48■■□□□ 1.19
Pcdhgb2Q91XX7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhgb2Q91XX7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.48■■□□□ 1.19
Pcdhgb2Q91XX7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Pcdhgb2Q91XX7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgb2Q91XX7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Pcdhgb2Q91XX7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhgb2Q91XX7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhgb2Q91XX7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhgb2Q91XX7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgb2Q91XX7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgb2Q91XX7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgb2Q91XX7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgb2Q91XX7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgb2Q91XX7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.42■■□□□ 1.18
Pcdhgb2Q91XX7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb2Q91XX7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb2Q91XX7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Pcdhgb2Q91XX7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb2Q91XX7 Gm16148-201ENSMUST00000119653 893 ntBASIC22.41■■□□□ 1.18
Pcdhgb2Q91XX7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgb2Q91XX7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgb2Q91XX7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgb2Q91XX7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgb2Q91XX7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgb2Q91XX7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgb2Q91XX7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgb2Q91XX7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgb2Q91XX7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.18
Pcdhgb2Q91XX7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.39■■□□□ 1.17
Pcdhgb2Q91XX7 Gm24804-201ENSMUST00000174982 85 ntBASIC22.39■■□□□ 1.17
Pcdhgb2Q91XX7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgb2Q91XX7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms