Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.07■■□□□ 1.6
Trim60Q8VI40 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Trim60Q8VI40 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Trim60Q8VI40 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Trim60Q8VI40 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim60Q8VI40 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Trim60Q8VI40 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim60Q8VI40 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim60Q8VI40 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trim60Q8VI40 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trim60Q8VI40 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.04■■□□□ 1.6
Trim60Q8VI40 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.04■■□□□ 1.6
Trim60Q8VI40 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trim60Q8VI40 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Trim60Q8VI40 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trim60Q8VI40 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Trim60Q8VI40 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Trim60Q8VI40 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Trim60Q8VI40 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Trim60Q8VI40 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Trim60Q8VI40 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Trim60Q8VI40 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Trim60Q8VI40 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Trim60Q8VI40 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.98■■□□□ 1.59
Trim60Q8VI40 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Trim60Q8VI40 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Trim60Q8VI40 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Trim60Q8VI40 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trim60Q8VI40 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Trim60Q8VI40 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim60Q8VI40 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.96■■□□□ 1.59
Trim60Q8VI40 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim60Q8VI40 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trim60Q8VI40 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.93■■□□□ 1.58
Trim60Q8VI40 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Trim60Q8VI40 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Trim60Q8VI40 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Trim60Q8VI40 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Trim60Q8VI40 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trim60Q8VI40 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Trim60Q8VI40 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trim60Q8VI40 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Trim60Q8VI40 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Trim60Q8VI40 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.89■■□□□ 1.57
Trim60Q8VI40 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
Trim60Q8VI40 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim60Q8VI40 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim60Q8VI40 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trim60Q8VI40 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.87■■□□□ 1.57
Trim60Q8VI40 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim60Q8VI40 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim60Q8VI40 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trim60Q8VI40 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Trim60Q8VI40 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.82■■□□□ 1.56
Trim60Q8VI40 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Trim60Q8VI40 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim60Q8VI40 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Trim60Q8VI40 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim60Q8VI40 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim60Q8VI40 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Trim60Q8VI40 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim60Q8VI40 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim60Q8VI40 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim60Q8VI40 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim60Q8VI40 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Trim60Q8VI40 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim60Q8VI40 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Trim60Q8VI40 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim60Q8VI40 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim60Q8VI40 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim60Q8VI40 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Trim60Q8VI40 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Trim60Q8VI40 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Trim60Q8VI40 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Trim60Q8VI40 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Trim60Q8VI40 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Trim60Q8VI40 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim60Q8VI40 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Trim60Q8VI40 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim60Q8VI40 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Trim60Q8VI40 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Trim60Q8VI40 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim60Q8VI40 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Trim60Q8VI40 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Trim60Q8VI40 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Trim60Q8VI40 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Trim60Q8VI40 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim60Q8VI40 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim60Q8VI40 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim60Q8VI40 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim60Q8VI40 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.68■■□□□ 1.54
Trim60Q8VI40 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Trim60Q8VI40 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.67■■□□□ 1.54
Trim60Q8VI40 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim60Q8VI40 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Trim60Q8VI40 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Trim60Q8VI40 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim60Q8VI40 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim60Q8VI40 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim60Q8VI40 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms