Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Vps39Q8R5L3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Vps39Q8R5L3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Vps39Q8R5L3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Vps39Q8R5L3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Vps39Q8R5L3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Vps39Q8R5L3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vps39Q8R5L3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vps39Q8R5L3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Vps39Q8R5L3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.26■■□□□ 1.47
Vps39Q8R5L3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Vps39Q8R5L3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Vps39Q8R5L3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Vps39Q8R5L3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Vps39Q8R5L3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Vps39Q8R5L3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Vps39Q8R5L3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vps39Q8R5L3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vps39Q8R5L3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Vps39Q8R5L3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Vps39Q8R5L3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Vps39Q8R5L3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Vps39Q8R5L3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Vps39Q8R5L3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Vps39Q8R5L3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Vps39Q8R5L3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Vps39Q8R5L3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Vps39Q8R5L3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.16■■□□□ 1.46
Vps39Q8R5L3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Vps39Q8R5L3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Vps39Q8R5L3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Vps39Q8R5L3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.15■■□□□ 1.46
Vps39Q8R5L3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Vps39Q8R5L3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Vps39Q8R5L3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vps39Q8R5L3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.12■■□□□ 1.45
Vps39Q8R5L3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Vps39Q8R5L3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Vps39Q8R5L3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Vps39Q8R5L3 Zfp131-205ENSMUST00000223812 663 ntBASIC24.11■■□□□ 1.45
Vps39Q8R5L3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.1■■□□□ 1.45
Vps39Q8R5L3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Vps39Q8R5L3 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.09■■□□□ 1.45
Vps39Q8R5L3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Vps39Q8R5L3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Vps39Q8R5L3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Vps39Q8R5L3 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.06■■□□□ 1.44
Vps39Q8R5L3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Vps39Q8R5L3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Vps39Q8R5L3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Vps39Q8R5L3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vps39Q8R5L3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.04■■□□□ 1.44
Vps39Q8R5L3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vps39Q8R5L3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Vps39Q8R5L3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Vps39Q8R5L3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Vps39Q8R5L3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Vps39Q8R5L3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
Vps39Q8R5L3 Tdp2-203ENSMUST00000223804 1136 ntBASIC24■■□□□ 1.43
Vps39Q8R5L3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Vps39Q8R5L3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Vps39Q8R5L3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
Vps39Q8R5L3 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.99■■□□□ 1.43
Vps39Q8R5L3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Vps39Q8R5L3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Vps39Q8R5L3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Vps39Q8R5L3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Vps39Q8R5L3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Vps39Q8R5L3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.97■■□□□ 1.43
Vps39Q8R5L3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.97■■□□□ 1.43
Vps39Q8R5L3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.97■■□□□ 1.43
Vps39Q8R5L3 Gm9397-201ENSMUST00000200125 605 ntBASIC23.96■■□□□ 1.43
Vps39Q8R5L3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Vps39Q8R5L3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Vps39Q8R5L3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Vps39Q8R5L3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.95■■□□□ 1.42
Vps39Q8R5L3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Vps39Q8R5L3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.93■■□□□ 1.42
Vps39Q8R5L3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Vps39Q8R5L3 Gm24970-201ENSMUST00000175582 82 ntBASIC23.92■■□□□ 1.42
Vps39Q8R5L3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Vps39Q8R5L3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.91■■□□□ 1.42
Vps39Q8R5L3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Vps39Q8R5L3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Vps39Q8R5L3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.91■■□□□ 1.42
Vps39Q8R5L3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Vps39Q8R5L3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Vps39Q8R5L3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Vps39Q8R5L3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vps39Q8R5L3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vps39Q8R5L3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Vps39Q8R5L3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vps39Q8R5L3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vps39Q8R5L3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vps39Q8R5L3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.86■■□□□ 1.41
Vps39Q8R5L3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vps39Q8R5L3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.84■■□□□ 1.41
Vps39Q8R5L3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vps39Q8R5L3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vps39Q8R5L3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 126 ms