Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Usp33Q8R5K2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.38■■■□□ 2.13
Usp33Q8R5K2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Usp33Q8R5K2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.37■■■□□ 2.13
Usp33Q8R5K2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Usp33Q8R5K2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Usp33Q8R5K2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.36■■■□□ 2.13
Usp33Q8R5K2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Usp33Q8R5K2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Usp33Q8R5K2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.35■■■□□ 2.13
Usp33Q8R5K2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.35■■■□□ 2.13
Usp33Q8R5K2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Usp33Q8R5K2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Usp33Q8R5K2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.34■■■□□ 2.13
Usp33Q8R5K2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Usp33Q8R5K2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Usp33Q8R5K2 Gm11175-201ENSMUST00000116172 543 ntBASIC28.33■■■□□ 2.13
Usp33Q8R5K2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Usp33Q8R5K2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Usp33Q8R5K2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Usp33Q8R5K2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Usp33Q8R5K2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Usp33Q8R5K2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Usp33Q8R5K2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Usp33Q8R5K2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.3■■■□□ 2.12
Usp33Q8R5K2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Usp33Q8R5K2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.29■■■□□ 2.12
Usp33Q8R5K2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
Usp33Q8R5K2 Mir6538-201ENSMUST00000183713 110 ntBASIC28.29■■■□□ 2.12
Usp33Q8R5K2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Usp33Q8R5K2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Usp33Q8R5K2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.26■■■□□ 2.11
Usp33Q8R5K2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
Usp33Q8R5K2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Usp33Q8R5K2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Usp33Q8R5K2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Usp33Q8R5K2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Usp33Q8R5K2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Usp33Q8R5K2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
Usp33Q8R5K2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Usp33Q8R5K2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Usp33Q8R5K2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Usp33Q8R5K2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
Usp33Q8R5K2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Usp33Q8R5K2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.15■■■□□ 2.1
Usp33Q8R5K2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.13■■■□□ 2.09
Usp33Q8R5K2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Usp33Q8R5K2 Cap2-205ENSMUST00000225824 1634 ntBASIC28.12■■■□□ 2.09
Usp33Q8R5K2 Gm6311-201ENSMUST00000073790 878 ntBASIC28.11■■■□□ 2.09
Usp33Q8R5K2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.11■■■□□ 2.09
Usp33Q8R5K2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Usp33Q8R5K2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Usp33Q8R5K2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Usp33Q8R5K2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Usp33Q8R5K2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Usp33Q8R5K2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Usp33Q8R5K2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Usp33Q8R5K2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Usp33Q8R5K2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Usp33Q8R5K2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Usp33Q8R5K2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Usp33Q8R5K2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Usp33Q8R5K2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
Usp33Q8R5K2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Usp33Q8R5K2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Usp33Q8R5K2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.05■■■□□ 2.08
Usp33Q8R5K2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Usp33Q8R5K2 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.04■■■□□ 2.08
Usp33Q8R5K2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Usp33Q8R5K2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Usp33Q8R5K2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Usp33Q8R5K2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
Usp33Q8R5K2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Usp33Q8R5K2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.02■■■□□ 2.08
Usp33Q8R5K2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.02■■■□□ 2.08
Usp33Q8R5K2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.01■■■□□ 2.07
Usp33Q8R5K2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
Usp33Q8R5K2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Usp33Q8R5K2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
Usp33Q8R5K2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
Usp33Q8R5K2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.98■■■□□ 2.07
Usp33Q8R5K2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.98■■■□□ 2.07
Usp33Q8R5K2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.95■■■□□ 2.07
Usp33Q8R5K2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.95■■■□□ 2.06
Usp33Q8R5K2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Usp33Q8R5K2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Usp33Q8R5K2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Usp33Q8R5K2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.93■■■□□ 2.06
Usp33Q8R5K2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
Usp33Q8R5K2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Usp33Q8R5K2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Usp33Q8R5K2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Usp33Q8R5K2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Usp33Q8R5K2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
Usp33Q8R5K2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.9■■■□□ 2.06
Usp33Q8R5K2 Gm30023-201ENSMUST00000197970 889 ntBASIC27.9■■■□□ 2.06
Usp33Q8R5K2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Usp33Q8R5K2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27.89■■■□□ 2.06
Usp33Q8R5K2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Usp33Q8R5K2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms