Protein–RNA interactions for Protein: Q8R420

Abca3, ATP-binding cassette sub-family A member 3, mousemouse

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca3Q8R420 Gm2415-204ENSMUST00000190235 2004 ntBASIC31,79■■■□□ 2,68
Abca3Q8R420 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31,77■■■□□ 2,68
Abca3Q8R420 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC31,77■■■□□ 2,68
Abca3Q8R420 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31,77■■■□□ 2,68
Abca3Q8R420 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31,77■■■□□ 2,68
Abca3Q8R420 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC31,77■■■□□ 2,68
Abca3Q8R420 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC31,75■■■□□ 2,67
Abca3Q8R420 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31,74■■■□□ 2,67
Abca3Q8R420 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31,74■■■□□ 2,67
Abca3Q8R420 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC31,74■■■□□ 2,67
Abca3Q8R420 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31,73■■■□□ 2,67
Abca3Q8R420 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31,73■■■□□ 2,67
Abca3Q8R420 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC31,72■■■□□ 2,67
Abca3Q8R420 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC31,72■■■□□ 2,67
Abca3Q8R420 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31,72■■■□□ 2,67
Abca3Q8R420 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31,71■■■□□ 2,67
Abca3Q8R420 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31,69■■■□□ 2,66
Abca3Q8R420 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31,69■■■□□ 2,66
Abca3Q8R420 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC31,68■■■□□ 2,66
Abca3Q8R420 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC31,66■■■□□ 2,66
Abca3Q8R420 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31,65■■■□□ 2,66
Abca3Q8R420 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC31,64■■■□□ 2,66
Abca3Q8R420 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31,64■■■□□ 2,66
Abca3Q8R420 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31,64■■■□□ 2,66
Abca3Q8R420 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31,63■■■□□ 2,65
Abca3Q8R420 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC31,63■■■□□ 2,65
Abca3Q8R420 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31,62■■■□□ 2,65
Abca3Q8R420 Gm6345-201ENSMUST00000180378 1691 ntBASIC31,59■■■□□ 2,65
Abca3Q8R420 Cap2-205ENSMUST00000225824 1634 ntBASIC31,59■■■□□ 2,65
Abca3Q8R420 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31,58■■■□□ 2,65
Abca3Q8R420 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31,58■■■□□ 2,65
Abca3Q8R420 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31,56■■■□□ 2,64
Abca3Q8R420 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31,54■■■□□ 2,64
Abca3Q8R420 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC31,52■■■□□ 2,64
Abca3Q8R420 AC131739.1-201ENSMUST00000221692 1245 ntBASIC31,51■■■□□ 2,63
Abca3Q8R420 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31,51■■■□□ 2,63
Abca3Q8R420 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC31,51■■■□□ 2,63
Abca3Q8R420 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31,5■■■□□ 2,63
Abca3Q8R420 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31,49■■■□□ 2,63
Abca3Q8R420 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31,49■■■□□ 2,63
Abca3Q8R420 Gm6658-202ENSMUST00000209493 1885 ntBASIC31,48■■■□□ 2,63
Abca3Q8R420 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC31,48■■■□□ 2,63
Abca3Q8R420 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31,48■■■□□ 2,63
Abca3Q8R420 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC31,48■■■□□ 2,63
Abca3Q8R420 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC31,47■■■□□ 2,63
Abca3Q8R420 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31,46■■■□□ 2,63
Abca3Q8R420 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31,46■■■□□ 2,63
Abca3Q8R420 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31,44■■■□□ 2,62
Abca3Q8R420 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC31,43■■■□□ 2,62
Abca3Q8R420 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC31,43■■■□□ 2,62
Abca3Q8R420 AC167019.3-201ENSMUST00000228225 1266 ntBASIC31,41■■■□□ 2,62
Abca3Q8R420 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC31,41■■■□□ 2,62
Abca3Q8R420 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC31,41■■■□□ 2,62
Abca3Q8R420 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC31,41■■■□□ 2,62
Abca3Q8R420 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC31,38■■■□□ 2,61
Abca3Q8R420 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC31,38■■■□□ 2,61
Abca3Q8R420 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC31,38■■■□□ 2,61
Abca3Q8R420 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31,38■■■□□ 2,61
Abca3Q8R420 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC31,38■■■□□ 2,61
Abca3Q8R420 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC31,36■■■□□ 2,61
Abca3Q8R420 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC31,35■■■□□ 2,61
Abca3Q8R420 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC31,35■■■□□ 2,61
Abca3Q8R420 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC31,35■■■□□ 2,61
Abca3Q8R420 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC31,35■■■□□ 2,61
Abca3Q8R420 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC31,34■■■□□ 2,61
Abca3Q8R420 Gm6311-201ENSMUST00000073790 878 ntBASIC31,34■■■□□ 2,61
Abca3Q8R420 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31,34■■■□□ 2,61
Abca3Q8R420 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31,34■■■□□ 2,61
Abca3Q8R420 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC31,34■■■□□ 2,61
Abca3Q8R420 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC31,33■■■□□ 2,61
Abca3Q8R420 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC31,32■■■□□ 2,61
Abca3Q8R420 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31,32■■■□□ 2,6
Abca3Q8R420 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC31,31■■■□□ 2,6
Abca3Q8R420 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31,31■■■□□ 2,6
Abca3Q8R420 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31,31■■■□□ 2,6
Abca3Q8R420 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC31,3■■■□□ 2,6
Abca3Q8R420 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Abca3Q8R420 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31,3■■■□□ 2,6
Abca3Q8R420 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC31,29■■■□□ 2,6
Abca3Q8R420 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC31,29■■■□□ 2,6
Abca3Q8R420 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31,29■■■□□ 2,6
Abca3Q8R420 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC31,29■■■□□ 2,6
Abca3Q8R420 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC31,28■■■□□ 2,6
Abca3Q8R420 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC31,27■■■□□ 2,6
Abca3Q8R420 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC31,27■■■□□ 2,6
Abca3Q8R420 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC31,25■■■□□ 2,59
Abca3Q8R420 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31,25■■■□□ 2,59
Abca3Q8R420 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31,25■■■□□ 2,59
Abca3Q8R420 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC31,24■■■□□ 2,59
Abca3Q8R420 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC31,24■■■□□ 2,59
Abca3Q8R420 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC31,23■■■□□ 2,59
Abca3Q8R420 Particl-201ENSMUST00000205370 1560 ntBASIC31,23■■■□□ 2,59
Abca3Q8R420 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC31,23■■■□□ 2,59
Abca3Q8R420 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31,23■■■□□ 2,59
Abca3Q8R420 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31,22■■■□□ 2,59
Abca3Q8R420 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC31,22■■■□□ 2,59
Abca3Q8R420 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC31,22■■■□□ 2,59
Abca3Q8R420 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC31,21■■■□□ 2,59
Abca3Q8R420 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC31,2■■■□□ 2,59
Abca3Q8R420 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31,2■■■□□ 2,58
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms