Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC33.16■■■□□ 2.9
Ddx54Q8K4L0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Ddx54Q8K4L0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Ddx54Q8K4L0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Ddx54Q8K4L0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
Ddx54Q8K4L0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
Ddx54Q8K4L0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
Ddx54Q8K4L0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Ddx54Q8K4L0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC33.14■■■□□ 2.9
Ddx54Q8K4L0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC33.13■■■□□ 2.89
Ddx54Q8K4L0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC33.13■■■□□ 2.89
Ddx54Q8K4L0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Ddx54Q8K4L0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC33.12■■■□□ 2.89
Ddx54Q8K4L0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC33.12■■■□□ 2.89
Ddx54Q8K4L0 Gm30346-201ENSMUST00000218641 1699 ntBASIC33.11■■■□□ 2.89
Ddx54Q8K4L0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC33.11■■■□□ 2.89
Ddx54Q8K4L0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC33.1■■■□□ 2.89
Ddx54Q8K4L0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ddx54Q8K4L0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Ddx54Q8K4L0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Ddx54Q8K4L0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC33.09■■■□□ 2.89
Ddx54Q8K4L0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC33.08■■■□□ 2.89
Ddx54Q8K4L0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC33.06■■■□□ 2.88
Ddx54Q8K4L0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Ddx54Q8K4L0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ddx54Q8K4L0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC33.03■■■□□ 2.88
Ddx54Q8K4L0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ddx54Q8K4L0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
Ddx54Q8K4L0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Ddx54Q8K4L0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ddx54Q8K4L0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC33■■■□□ 2.87
Ddx54Q8K4L0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC32.99■■■□□ 2.87
Ddx54Q8K4L0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ddx54Q8K4L0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ddx54Q8K4L0 Gm6345-201ENSMUST00000180378 1691 ntBASIC32.96■■■□□ 2.87
Ddx54Q8K4L0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ddx54Q8K4L0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Ddx54Q8K4L0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Ddx54Q8K4L0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Ddx54Q8K4L0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC32.94■■■□□ 2.86
Ddx54Q8K4L0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Ddx54Q8K4L0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Ddx54Q8K4L0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Ddx54Q8K4L0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ddx54Q8K4L0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ddx54Q8K4L0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ddx54Q8K4L0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Ddx54Q8K4L0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Ddx54Q8K4L0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
Ddx54Q8K4L0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Ddx54Q8K4L0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.85
Ddx54Q8K4L0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC32.88■■■□□ 2.85
Ddx54Q8K4L0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Ddx54Q8K4L0 Gm15039-201ENSMUST00000118914 875 ntBASIC32.85■■■□□ 2.85
Ddx54Q8K4L0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Ddx54Q8K4L0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC32.83■■■□□ 2.85
Ddx54Q8K4L0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC32.83■■■□□ 2.85
Ddx54Q8K4L0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC32.83■■■□□ 2.85
Ddx54Q8K4L0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ddx54Q8K4L0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Ddx54Q8K4L0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Ddx54Q8K4L0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Ddx54Q8K4L0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Ddx54Q8K4L0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Ddx54Q8K4L0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Ddx54Q8K4L0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
Ddx54Q8K4L0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Ddx54Q8K4L0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC32.76■■■□□ 2.83
Ddx54Q8K4L0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
Ddx54Q8K4L0 Gm12366-201ENSMUST00000121722 873 ntBASIC32.76■■■□□ 2.83
Ddx54Q8K4L0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC32.76■■■□□ 2.83
Ddx54Q8K4L0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Ddx54Q8K4L0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC32.76■■■□□ 2.83
Ddx54Q8K4L0 Gm5786-201ENSMUST00000085368 882 ntBASIC32.76■■■□□ 2.83
Ddx54Q8K4L0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Ddx54Q8K4L0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Ddx54Q8K4L0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Ddx54Q8K4L0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Ddx54Q8K4L0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC32.74■■■□□ 2.83
Ddx54Q8K4L0 Scarna2-201ENSMUST00000157560 414 ntBASIC32.73■■■□□ 2.83
Ddx54Q8K4L0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Ddx54Q8K4L0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC32.73■■■□□ 2.83
Ddx54Q8K4L0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Ddx54Q8K4L0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC32.72■■■□□ 2.83
Ddx54Q8K4L0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Ddx54Q8K4L0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Ddx54Q8K4L0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Ddx54Q8K4L0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Ddx54Q8K4L0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Ddx54Q8K4L0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
Ddx54Q8K4L0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Ddx54Q8K4L0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Ddx54Q8K4L0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Ddx54Q8K4L0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Ddx54Q8K4L0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC32.66■■■□□ 2.82
Ddx54Q8K4L0 Gm11687-201ENSMUST00000118911 886 ntBASIC32.65■■■□□ 2.82
Ddx54Q8K4L0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Ddx54Q8K4L0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Ddx54Q8K4L0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC32.62■■■□□ 2.81
Ddx54Q8K4L0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms