Protein–RNA interactions for Protein: Q8K2Z4

Ncapd2, Condensin complex subunit 1, mousemouse

Predictions only

Length 1,392 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ncapd2Q8K2Z4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Ncapd2Q8K2Z4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
Ncapd2Q8K2Z4 Gm11175-201ENSMUST00000116172 543 ntBASIC33.17■■■□□ 2.9
Ncapd2Q8K2Z4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Ncapd2Q8K2Z4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Ncapd2Q8K2Z4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Ncapd2Q8K2Z4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Ncapd2Q8K2Z4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Ncapd2Q8K2Z4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
Ncapd2Q8K2Z4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
Ncapd2Q8K2Z4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
Ncapd2Q8K2Z4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC33.11■■■□□ 2.89
Ncapd2Q8K2Z4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Ncapd2Q8K2Z4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Ncapd2Q8K2Z4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
Ncapd2Q8K2Z4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Ncapd2Q8K2Z4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC33.09■■■□□ 2.89
Ncapd2Q8K2Z4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC33.08■■■□□ 2.89
Ncapd2Q8K2Z4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC33.08■■■□□ 2.89
Ncapd2Q8K2Z4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Ncapd2Q8K2Z4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Ncapd2Q8K2Z4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC33.06■■■□□ 2.88
Ncapd2Q8K2Z4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC33.05■■■□□ 2.88
Ncapd2Q8K2Z4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
Ncapd2Q8K2Z4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC33.02■■■□□ 2.88
Ncapd2Q8K2Z4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Ncapd2Q8K2Z4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC33.01■■■□□ 2.87
Ncapd2Q8K2Z4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Ncapd2Q8K2Z4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
Ncapd2Q8K2Z4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Ncapd2Q8K2Z4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ncapd2Q8K2Z4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC32.94■■■□□ 2.86
Ncapd2Q8K2Z4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Ncapd2Q8K2Z4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC32.94■■■□□ 2.86
Ncapd2Q8K2Z4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Ncapd2Q8K2Z4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC32.92■■■□□ 2.86
Ncapd2Q8K2Z4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Ncapd2Q8K2Z4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
Ncapd2Q8K2Z4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Ncapd2Q8K2Z4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC32.89■■■□□ 2.86
Ncapd2Q8K2Z4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC32.89■■■□□ 2.86
Ncapd2Q8K2Z4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC32.89■■■□□ 2.86
Ncapd2Q8K2Z4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Ncapd2Q8K2Z4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Ncapd2Q8K2Z4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC32.88■■■□□ 2.85
Ncapd2Q8K2Z4 Cap2-205ENSMUST00000225824 1634 ntBASIC32.87■■■□□ 2.85
Ncapd2Q8K2Z4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Ncapd2Q8K2Z4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC32.85■■■□□ 2.85
Ncapd2Q8K2Z4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32.84■■■□□ 2.85
Ncapd2Q8K2Z4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC32.83■■■□□ 2.85
Ncapd2Q8K2Z4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ncapd2Q8K2Z4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ncapd2Q8K2Z4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
Ncapd2Q8K2Z4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC32.81■■■□□ 2.84
Ncapd2Q8K2Z4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Ncapd2Q8K2Z4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Ncapd2Q8K2Z4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Ncapd2Q8K2Z4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Ncapd2Q8K2Z4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
Ncapd2Q8K2Z4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Ncapd2Q8K2Z4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
Ncapd2Q8K2Z4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC32.76■■■□□ 2.84
Ncapd2Q8K2Z4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC32.76■■■□□ 2.83
Ncapd2Q8K2Z4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
Ncapd2Q8K2Z4 Gm6345-201ENSMUST00000180378 1691 ntBASIC32.74■■■□□ 2.83
Ncapd2Q8K2Z4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Ncapd2Q8K2Z4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC32.73■■■□□ 2.83
Ncapd2Q8K2Z4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Ncapd2Q8K2Z4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC32.72■■■□□ 2.83
Ncapd2Q8K2Z4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Ncapd2Q8K2Z4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
Ncapd2Q8K2Z4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Ncapd2Q8K2Z4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Ncapd2Q8K2Z4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Ncapd2Q8K2Z4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Ncapd2Q8K2Z4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Ncapd2Q8K2Z4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC32.64■■■□□ 2.82
Ncapd2Q8K2Z4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Ncapd2Q8K2Z4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Ncapd2Q8K2Z4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Ncapd2Q8K2Z4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC32.63■■■□□ 2.81
Ncapd2Q8K2Z4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC32.61■■■□□ 2.81
Ncapd2Q8K2Z4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC32.61■■■□□ 2.81
Ncapd2Q8K2Z4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC32.59■■■□□ 2.81
Ncapd2Q8K2Z4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Ncapd2Q8K2Z4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC32.57■■■□□ 2.81
Ncapd2Q8K2Z4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
Ncapd2Q8K2Z4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC32.57■■■□□ 2.8
Ncapd2Q8K2Z4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC32.57■■■□□ 2.8
Ncapd2Q8K2Z4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ncapd2Q8K2Z4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ncapd2Q8K2Z4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Ncapd2Q8K2Z4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ncapd2Q8K2Z4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC32.56■■■□□ 2.8
Ncapd2Q8K2Z4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Ncapd2Q8K2Z4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC32.56■■■□□ 2.8
Ncapd2Q8K2Z4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Ncapd2Q8K2Z4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC32.54■■■□□ 2.8
Ncapd2Q8K2Z4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC32.54■■■□□ 2.8
Ncapd2Q8K2Z4 Gm30023-201ENSMUST00000197970 889 ntBASIC32.53■■■□□ 2.8
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms