Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SynpoQ8CC35 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.25■■□□□ 1.31
SynpoQ8CC35 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SynpoQ8CC35 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SynpoQ8CC35 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.25■■□□□ 1.31
SynpoQ8CC35 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SynpoQ8CC35 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SynpoQ8CC35 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SynpoQ8CC35 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SynpoQ8CC35 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SynpoQ8CC35 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SynpoQ8CC35 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SynpoQ8CC35 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SynpoQ8CC35 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.22■■□□□ 1.31
SynpoQ8CC35 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SynpoQ8CC35 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SynpoQ8CC35 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
SynpoQ8CC35 Gm6821-201ENSMUST00000107540 542 ntBASIC23.21■■□□□ 1.31
SynpoQ8CC35 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SynpoQ8CC35 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SynpoQ8CC35 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SynpoQ8CC35 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.21■■□□□ 1.31
SynpoQ8CC35 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SynpoQ8CC35 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.2■■□□□ 1.3
SynpoQ8CC35 Gm8503-201ENSMUST00000118131 455 ntBASIC23.2■■□□□ 1.3
SynpoQ8CC35 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SynpoQ8CC35 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SynpoQ8CC35 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SynpoQ8CC35 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SynpoQ8CC35 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SynpoQ8CC35 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SynpoQ8CC35 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SynpoQ8CC35 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SynpoQ8CC35 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SynpoQ8CC35 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SynpoQ8CC35 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SynpoQ8CC35 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.14■■□□□ 1.29
SynpoQ8CC35 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SynpoQ8CC35 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SynpoQ8CC35 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SynpoQ8CC35 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SynpoQ8CC35 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.13■■□□□ 1.29
SynpoQ8CC35 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SynpoQ8CC35 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SynpoQ8CC35 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.12■■□□□ 1.29
SynpoQ8CC35 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.12■■□□□ 1.29
SynpoQ8CC35 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SynpoQ8CC35 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SynpoQ8CC35 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SynpoQ8CC35 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SynpoQ8CC35 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SynpoQ8CC35 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.09■■□□□ 1.29
SynpoQ8CC35 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SynpoQ8CC35 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SynpoQ8CC35 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SynpoQ8CC35 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SynpoQ8CC35 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SynpoQ8CC35 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.07■■□□□ 1.28
SynpoQ8CC35 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SynpoQ8CC35 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SynpoQ8CC35 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.07■■□□□ 1.28
SynpoQ8CC35 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SynpoQ8CC35 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SynpoQ8CC35 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.04■■□□□ 1.28
SynpoQ8CC35 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.04■■□□□ 1.28
SynpoQ8CC35 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SynpoQ8CC35 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SynpoQ8CC35 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SynpoQ8CC35 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SynpoQ8CC35 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SynpoQ8CC35 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.03■■□□□ 1.28
SynpoQ8CC35 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SynpoQ8CC35 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SynpoQ8CC35 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
SynpoQ8CC35 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.02■■□□□ 1.28
SynpoQ8CC35 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SynpoQ8CC35 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SynpoQ8CC35 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SynpoQ8CC35 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SynpoQ8CC35 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
SynpoQ8CC35 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23■■□□□ 1.27
SynpoQ8CC35 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SynpoQ8CC35 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SynpoQ8CC35 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.98■■□□□ 1.27
SynpoQ8CC35 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SynpoQ8CC35 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SynpoQ8CC35 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SynpoQ8CC35 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SynpoQ8CC35 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SynpoQ8CC35 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SynpoQ8CC35 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SynpoQ8CC35 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SynpoQ8CC35 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SynpoQ8CC35 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SynpoQ8CC35 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SynpoQ8CC35 Nkain2-201ENSMUST00000092602 558 ntBASIC22.95■■□□□ 1.26
SynpoQ8CC35 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SynpoQ8CC35 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SynpoQ8CC35 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SynpoQ8CC35 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms