Protein–RNA interactions for Protein: Q8C4Y3

Nelfb, Negative elongation factor B, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NelfbQ8C4Y3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NelfbQ8C4Y3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
NelfbQ8C4Y3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.91■■□□□ 1.9
NelfbQ8C4Y3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NelfbQ8C4Y3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.89■■□□□ 1.9
NelfbQ8C4Y3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
NelfbQ8C4Y3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
NelfbQ8C4Y3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
NelfbQ8C4Y3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
NelfbQ8C4Y3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NelfbQ8C4Y3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NelfbQ8C4Y3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NelfbQ8C4Y3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NelfbQ8C4Y3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NelfbQ8C4Y3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NelfbQ8C4Y3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NelfbQ8C4Y3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
NelfbQ8C4Y3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
NelfbQ8C4Y3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
NelfbQ8C4Y3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NelfbQ8C4Y3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NelfbQ8C4Y3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NelfbQ8C4Y3 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.83■■□□□ 1.89
NelfbQ8C4Y3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
NelfbQ8C4Y3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
NelfbQ8C4Y3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
NelfbQ8C4Y3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NelfbQ8C4Y3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NelfbQ8C4Y3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
NelfbQ8C4Y3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
NelfbQ8C4Y3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NelfbQ8C4Y3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
NelfbQ8C4Y3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
NelfbQ8C4Y3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
NelfbQ8C4Y3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
NelfbQ8C4Y3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.75■■□□□ 1.87
NelfbQ8C4Y3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
NelfbQ8C4Y3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NelfbQ8C4Y3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
NelfbQ8C4Y3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NelfbQ8C4Y3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
NelfbQ8C4Y3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
NelfbQ8C4Y3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
NelfbQ8C4Y3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
NelfbQ8C4Y3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
NelfbQ8C4Y3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NelfbQ8C4Y3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.69■■□□□ 1.86
NelfbQ8C4Y3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NelfbQ8C4Y3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
NelfbQ8C4Y3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
NelfbQ8C4Y3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
NelfbQ8C4Y3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
NelfbQ8C4Y3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.68■■□□□ 1.86
NelfbQ8C4Y3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NelfbQ8C4Y3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
NelfbQ8C4Y3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
NelfbQ8C4Y3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
NelfbQ8C4Y3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NelfbQ8C4Y3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NelfbQ8C4Y3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.63■■□□□ 1.85
NelfbQ8C4Y3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.63■■□□□ 1.85
NelfbQ8C4Y3 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.63■■□□□ 1.85
NelfbQ8C4Y3 Zfp131-205ENSMUST00000223812 663 ntBASIC26.63■■□□□ 1.85
NelfbQ8C4Y3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
NelfbQ8C4Y3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.62■■□□□ 1.85
NelfbQ8C4Y3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
NelfbQ8C4Y3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
NelfbQ8C4Y3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.61■■□□□ 1.85
NelfbQ8C4Y3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
NelfbQ8C4Y3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NelfbQ8C4Y3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NelfbQ8C4Y3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
NelfbQ8C4Y3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NelfbQ8C4Y3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NelfbQ8C4Y3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
NelfbQ8C4Y3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.55■■□□□ 1.84
NelfbQ8C4Y3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.55■■□□□ 1.84
NelfbQ8C4Y3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.54■■□□□ 1.84
NelfbQ8C4Y3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
NelfbQ8C4Y3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NelfbQ8C4Y3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NelfbQ8C4Y3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.53■■□□□ 1.84
NelfbQ8C4Y3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NelfbQ8C4Y3 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.52■■□□□ 1.84
NelfbQ8C4Y3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
NelfbQ8C4Y3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.51■■□□□ 1.83
NelfbQ8C4Y3 Gm9397-201ENSMUST00000200125 605 ntBASIC26.51■■□□□ 1.83
NelfbQ8C4Y3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.5■■□□□ 1.83
NelfbQ8C4Y3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NelfbQ8C4Y3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NelfbQ8C4Y3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
NelfbQ8C4Y3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
NelfbQ8C4Y3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.49■■□□□ 1.83
NelfbQ8C4Y3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.49■■□□□ 1.83
NelfbQ8C4Y3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
NelfbQ8C4Y3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NelfbQ8C4Y3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NelfbQ8C4Y3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
NelfbQ8C4Y3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
NelfbQ8C4Y3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms