Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.42■■□□□ 1.66
Sh3rf3Q8C120 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sh3rf3Q8C120 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.42■■□□□ 1.66
Sh3rf3Q8C120 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.42■■□□□ 1.66
Sh3rf3Q8C120 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sh3rf3Q8C120 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
Sh3rf3Q8C120 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.41■■□□□ 1.66
Sh3rf3Q8C120 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Sh3rf3Q8C120 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sh3rf3Q8C120 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.4■■□□□ 1.66
Sh3rf3Q8C120 Gm45855-201ENSMUST00000212546 880 ntBASIC25.4■■□□□ 1.66
Sh3rf3Q8C120 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Sh3rf3Q8C120 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Sh3rf3Q8C120 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sh3rf3Q8C120 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sh3rf3Q8C120 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.36■■□□□ 1.65
Sh3rf3Q8C120 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sh3rf3Q8C120 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sh3rf3Q8C120 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.35■■□□□ 1.65
Sh3rf3Q8C120 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sh3rf3Q8C120 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Sh3rf3Q8C120 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sh3rf3Q8C120 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Sh3rf3Q8C120 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sh3rf3Q8C120 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sh3rf3Q8C120 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Sh3rf3Q8C120 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sh3rf3Q8C120 Gm24970-201ENSMUST00000175582 82 ntBASIC25.31■■□□□ 1.64
Sh3rf3Q8C120 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sh3rf3Q8C120 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Sh3rf3Q8C120 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Sh3rf3Q8C120 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sh3rf3Q8C120 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sh3rf3Q8C120 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sh3rf3Q8C120 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.29■■□□□ 1.64
Sh3rf3Q8C120 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Sh3rf3Q8C120 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.29■■□□□ 1.64
Sh3rf3Q8C120 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.29■■□□□ 1.64
Sh3rf3Q8C120 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Sh3rf3Q8C120 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.28■■□□□ 1.64
Sh3rf3Q8C120 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.28■■□□□ 1.64
Sh3rf3Q8C120 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Sh3rf3Q8C120 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
Sh3rf3Q8C120 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Sh3rf3Q8C120 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Sh3rf3Q8C120 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Sh3rf3Q8C120 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sh3rf3Q8C120 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sh3rf3Q8C120 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
Sh3rf3Q8C120 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Sh3rf3Q8C120 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Sh3rf3Q8C120 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Sh3rf3Q8C120 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Sh3rf3Q8C120 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
Sh3rf3Q8C120 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Sh3rf3Q8C120 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.2■■□□□ 1.62
Sh3rf3Q8C120 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Sh3rf3Q8C120 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.19■■□□□ 1.62
Sh3rf3Q8C120 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Sh3rf3Q8C120 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Sh3rf3Q8C120 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sh3rf3Q8C120 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sh3rf3Q8C120 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.16■■□□□ 1.62
Sh3rf3Q8C120 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sh3rf3Q8C120 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.16■■□□□ 1.62
Sh3rf3Q8C120 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Sh3rf3Q8C120 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Sh3rf3Q8C120 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.14■■□□□ 1.61
Sh3rf3Q8C120 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sh3rf3Q8C120 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sh3rf3Q8C120 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sh3rf3Q8C120 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sh3rf3Q8C120 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.12■■□□□ 1.61
Sh3rf3Q8C120 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sh3rf3Q8C120 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sh3rf3Q8C120 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Sh3rf3Q8C120 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Sh3rf3Q8C120 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sh3rf3Q8C120 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sh3rf3Q8C120 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Sh3rf3Q8C120 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sh3rf3Q8C120 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sh3rf3Q8C120 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.03■■□□□ 1.6
Sh3rf3Q8C120 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.01■■□□□ 1.59
Sh3rf3Q8C120 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Sh3rf3Q8C120 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sh3rf3Q8C120 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Sh3rf3Q8C120 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25■■□□□ 1.59
Sh3rf3Q8C120 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Sh3rf3Q8C120 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Sh3rf3Q8C120 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Sh3rf3Q8C120 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.99■■□□□ 1.59
Sh3rf3Q8C120 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Sh3rf3Q8C120 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Sh3rf3Q8C120 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.98■■□□□ 1.59
Sh3rf3Q8C120 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Sh3rf3Q8C120 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Sh3rf3Q8C120 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Sh3rf3Q8C120 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Sh3rf3Q8C120 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms