Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ppp4r4Q8C0Y0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ppp4r4Q8C0Y0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ppp4r4Q8C0Y0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ppp4r4Q8C0Y0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.34■■□□□ 1.49
Ppp4r4Q8C0Y0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ppp4r4Q8C0Y0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ppp4r4Q8C0Y0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ppp4r4Q8C0Y0 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.33■■□□□ 1.48
Ppp4r4Q8C0Y0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ppp4r4Q8C0Y0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ppp4r4Q8C0Y0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ppp4r4Q8C0Y0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.3■■□□□ 1.48
Ppp4r4Q8C0Y0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.3■■□□□ 1.48
Ppp4r4Q8C0Y0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ppp4r4Q8C0Y0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Ppp4r4Q8C0Y0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.3■■□□□ 1.48
Ppp4r4Q8C0Y0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ppp4r4Q8C0Y0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ppp4r4Q8C0Y0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Ppp4r4Q8C0Y0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.29■■□□□ 1.48
Ppp4r4Q8C0Y0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ppp4r4Q8C0Y0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ppp4r4Q8C0Y0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.27■■□□□ 1.48
Ppp4r4Q8C0Y0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ppp4r4Q8C0Y0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.26■■□□□ 1.47
Ppp4r4Q8C0Y0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ppp4r4Q8C0Y0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ppp4r4Q8C0Y0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ppp4r4Q8C0Y0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ppp4r4Q8C0Y0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.23■■□□□ 1.47
Ppp4r4Q8C0Y0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.22■■□□□ 1.47
Ppp4r4Q8C0Y0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.22■■□□□ 1.47
Ppp4r4Q8C0Y0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ppp4r4Q8C0Y0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ppp4r4Q8C0Y0 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.21■■□□□ 1.47
Ppp4r4Q8C0Y0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ppp4r4Q8C0Y0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ppp4r4Q8C0Y0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ppp4r4Q8C0Y0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ppp4r4Q8C0Y0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ppp4r4Q8C0Y0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ppp4r4Q8C0Y0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ppp4r4Q8C0Y0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ppp4r4Q8C0Y0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ppp4r4Q8C0Y0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ppp4r4Q8C0Y0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.16■■□□□ 1.46
Ppp4r4Q8C0Y0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
Ppp4r4Q8C0Y0 Amer2-203ENSMUST00000225247 2662 ntBASIC24.16■■□□□ 1.46
Ppp4r4Q8C0Y0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ppp4r4Q8C0Y0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ppp4r4Q8C0Y0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ppp4r4Q8C0Y0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ppp4r4Q8C0Y0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ppp4r4Q8C0Y0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Ppp4r4Q8C0Y0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ppp4r4Q8C0Y0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ppp4r4Q8C0Y0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ppp4r4Q8C0Y0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ppp4r4Q8C0Y0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ppp4r4Q8C0Y0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ppp4r4Q8C0Y0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ppp4r4Q8C0Y0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ppp4r4Q8C0Y0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.11■■□□□ 1.45
Ppp4r4Q8C0Y0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ppp4r4Q8C0Y0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ppp4r4Q8C0Y0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ppp4r4Q8C0Y0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
Ppp4r4Q8C0Y0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ppp4r4Q8C0Y0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ppp4r4Q8C0Y0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ppp4r4Q8C0Y0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Ppp4r4Q8C0Y0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ppp4r4Q8C0Y0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.08■■□□□ 1.45
Ppp4r4Q8C0Y0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ppp4r4Q8C0Y0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Ppp4r4Q8C0Y0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ppp4r4Q8C0Y0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ppp4r4Q8C0Y0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ppp4r4Q8C0Y0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ppp4r4Q8C0Y0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ppp4r4Q8C0Y0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ppp4r4Q8C0Y0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Ppp4r4Q8C0Y0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ppp4r4Q8C0Y0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ppp4r4Q8C0Y0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ppp4r4Q8C0Y0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ppp4r4Q8C0Y0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ppp4r4Q8C0Y0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ppp4r4Q8C0Y0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ppp4r4Q8C0Y0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Ppp4r4Q8C0Y0 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.03■■□□□ 1.44
Ppp4r4Q8C0Y0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ppp4r4Q8C0Y0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ppp4r4Q8C0Y0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.02■■□□□ 1.44
Ppp4r4Q8C0Y0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ppp4r4Q8C0Y0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ppp4r4Q8C0Y0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ppp4r4Q8C0Y0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ppp4r4Q8C0Y0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms