Protein–RNA interactions for Protein: Q64221

Nhlh2, Helix-loop-helix protein 2, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlh2Q64221 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nhlh2Q64221 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nhlh2Q64221 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nhlh2Q64221 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Nhlh2Q64221 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhlh2Q64221 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhlh2Q64221 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhlh2Q64221 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhlh2Q64221 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhlh2Q64221 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nhlh2Q64221 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.67■□□□□ 0.74
Nhlh2Q64221 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nhlh2Q64221 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nhlh2Q64221 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nhlh2Q64221 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.65■□□□□ 0.74
Nhlh2Q64221 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nhlh2Q64221 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nhlh2Q64221 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Nhlh2Q64221 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.64■□□□□ 0.73
Nhlh2Q64221 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nhlh2Q64221 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nhlh2Q64221 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nhlh2Q64221 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nhlh2Q64221 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nhlh2Q64221 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nhlh2Q64221 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nhlh2Q64221 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nhlh2Q64221 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nhlh2Q64221 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.61■□□□□ 0.73
Nhlh2Q64221 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nhlh2Q64221 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nhlh2Q64221 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nhlh2Q64221 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nhlh2Q64221 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.6■□□□□ 0.73
Nhlh2Q64221 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nhlh2Q64221 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nhlh2Q64221 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nhlh2Q64221 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
Nhlh2Q64221 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nhlh2Q64221 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nhlh2Q64221 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Nhlh2Q64221 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nhlh2Q64221 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nhlh2Q64221 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Nhlh2Q64221 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nhlh2Q64221 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nhlh2Q64221 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nhlh2Q64221 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nhlh2Q64221 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nhlh2Q64221 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nhlh2Q64221 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nhlh2Q64221 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nhlh2Q64221 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nhlh2Q64221 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nhlh2Q64221 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nhlh2Q64221 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nhlh2Q64221 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nhlh2Q64221 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nhlh2Q64221 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nhlh2Q64221 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nhlh2Q64221 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nhlh2Q64221 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nhlh2Q64221 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Nhlh2Q64221 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nhlh2Q64221 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nhlh2Q64221 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nhlh2Q64221 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nhlh2Q64221 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Nhlh2Q64221 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nhlh2Q64221 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.51■□□□□ 0.71
Nhlh2Q64221 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Nhlh2Q64221 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nhlh2Q64221 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nhlh2Q64221 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nhlh2Q64221 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.49■□□□□ 0.71
Nhlh2Q64221 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nhlh2Q64221 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nhlh2Q64221 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nhlh2Q64221 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nhlh2Q64221 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nhlh2Q64221 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Nhlh2Q64221 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.48■□□□□ 0.71
Nhlh2Q64221 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nhlh2Q64221 Gm24804-201ENSMUST00000174982 85 ntBASIC19.48■□□□□ 0.71
Nhlh2Q64221 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nhlh2Q64221 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nhlh2Q64221 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Nhlh2Q64221 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nhlh2Q64221 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nhlh2Q64221 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nhlh2Q64221 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nhlh2Q64221 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nhlh2Q64221 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.45■□□□□ 0.7
Nhlh2Q64221 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nhlh2Q64221 Gm16148-201ENSMUST00000119653 893 ntBASIC19.45■□□□□ 0.7
Nhlh2Q64221 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nhlh2Q64221 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nhlh2Q64221 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nhlh2Q64221 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nhlh2Q64221 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms