Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.42■■□□□ 1.18
SpenQ62504 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SpenQ62504 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SpenQ62504 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.41■■□□□ 1.18
SpenQ62504 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SpenQ62504 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SpenQ62504 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SpenQ62504 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
SpenQ62504 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SpenQ62504 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SpenQ62504 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SpenQ62504 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
SpenQ62504 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SpenQ62504 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SpenQ62504 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SpenQ62504 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SpenQ62504 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
SpenQ62504 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
SpenQ62504 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SpenQ62504 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SpenQ62504 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SpenQ62504 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SpenQ62504 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SpenQ62504 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SpenQ62504 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.34■■□□□ 1.17
SpenQ62504 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.33■■□□□ 1.17
SpenQ62504 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SpenQ62504 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.33■■□□□ 1.16
SpenQ62504 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.32■■□□□ 1.16
SpenQ62504 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SpenQ62504 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.32■■□□□ 1.16
SpenQ62504 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SpenQ62504 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.31■■□□□ 1.16
SpenQ62504 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SpenQ62504 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
SpenQ62504 Gm15039-201ENSMUST00000118914 875 ntBASIC22.3■■□□□ 1.16
SpenQ62504 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
SpenQ62504 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.29■■□□□ 1.16
SpenQ62504 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SpenQ62504 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SpenQ62504 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SpenQ62504 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.26■■□□□ 1.15
SpenQ62504 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.26■■□□□ 1.15
SpenQ62504 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SpenQ62504 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SpenQ62504 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SpenQ62504 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SpenQ62504 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SpenQ62504 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SpenQ62504 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SpenQ62504 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SpenQ62504 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SpenQ62504 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SpenQ62504 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SpenQ62504 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SpenQ62504 Gm6311-201ENSMUST00000073790 878 ntBASIC22.23■■□□□ 1.15
SpenQ62504 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SpenQ62504 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SpenQ62504 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SpenQ62504 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.2■■□□□ 1.14
SpenQ62504 Gm4799-201ENSMUST00000095396 657 ntBASIC22.19■■□□□ 1.14
SpenQ62504 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SpenQ62504 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SpenQ62504 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SpenQ62504 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
SpenQ62504 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SpenQ62504 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SpenQ62504 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.15■■□□□ 1.14
SpenQ62504 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SpenQ62504 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SpenQ62504 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
SpenQ62504 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SpenQ62504 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SpenQ62504 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SpenQ62504 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.14■■□□□ 1.13
SpenQ62504 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SpenQ62504 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.13■■□□□ 1.13
SpenQ62504 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SpenQ62504 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.13■■□□□ 1.13
SpenQ62504 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SpenQ62504 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpenQ62504 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.12■■□□□ 1.13
SpenQ62504 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpenQ62504 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.12■■□□□ 1.13
SpenQ62504 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.11■■□□□ 1.13
SpenQ62504 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.1■■□□□ 1.13
SpenQ62504 Gm12366-201ENSMUST00000121722 873 ntBASIC22.1■■□□□ 1.13
SpenQ62504 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.1■■□□□ 1.13
SpenQ62504 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.1■■□□□ 1.13
SpenQ62504 Gm5786-201ENSMUST00000085368 882 ntBASIC22.1■■□□□ 1.13
SpenQ62504 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SpenQ62504 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SpenQ62504 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SpenQ62504 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SpenQ62504 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SpenQ62504 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SpenQ62504 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SpenQ62504 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SpenQ62504 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SpenQ62504 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms