Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.11■□□□□ 0.81
SspnQ62147 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SspnQ62147 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SspnQ62147 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SspnQ62147 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SspnQ62147 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SspnQ62147 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SspnQ62147 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SspnQ62147 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.08■□□□□ 0.81
SspnQ62147 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SspnQ62147 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.08■□□□□ 0.8
SspnQ62147 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.07■□□□□ 0.8
SspnQ62147 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SspnQ62147 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SspnQ62147 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SspnQ62147 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SspnQ62147 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SspnQ62147 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SspnQ62147 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SspnQ62147 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SspnQ62147 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SspnQ62147 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SspnQ62147 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SspnQ62147 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SspnQ62147 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SspnQ62147 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SspnQ62147 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SspnQ62147 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SspnQ62147 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SspnQ62147 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SspnQ62147 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SspnQ62147 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SspnQ62147 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.02■□□□□ 0.8
SspnQ62147 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SspnQ62147 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20■□□□□ 0.79
SspnQ62147 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SspnQ62147 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SspnQ62147 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SspnQ62147 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SspnQ62147 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SspnQ62147 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SspnQ62147 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SspnQ62147 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SspnQ62147 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.95■□□□□ 0.78
SspnQ62147 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SspnQ62147 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SspnQ62147 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SspnQ62147 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SspnQ62147 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SspnQ62147 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SspnQ62147 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SspnQ62147 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SspnQ62147 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SspnQ62147 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SspnQ62147 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SspnQ62147 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SspnQ62147 Zfp131-205ENSMUST00000223812 663 ntBASIC19.92■□□□□ 0.78
SspnQ62147 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SspnQ62147 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.92■□□□□ 0.78
SspnQ62147 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SspnQ62147 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SspnQ62147 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SspnQ62147 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SspnQ62147 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.89■□□□□ 0.77
SspnQ62147 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.89■□□□□ 0.77
SspnQ62147 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SspnQ62147 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SspnQ62147 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.88■□□□□ 0.77
SspnQ62147 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
SspnQ62147 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SspnQ62147 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
SspnQ62147 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SspnQ62147 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SspnQ62147 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SspnQ62147 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SspnQ62147 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
SspnQ62147 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SspnQ62147 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SspnQ62147 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SspnQ62147 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SspnQ62147 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SspnQ62147 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.84■□□□□ 0.77
SspnQ62147 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SspnQ62147 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SspnQ62147 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.83■□□□□ 0.77
SspnQ62147 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SspnQ62147 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SspnQ62147 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SspnQ62147 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SspnQ62147 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SspnQ62147 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SspnQ62147 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.82■□□□□ 0.76
SspnQ62147 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.82■□□□□ 0.76
SspnQ62147 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.82■□□□□ 0.76
SspnQ62147 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.82■□□□□ 0.76
SspnQ62147 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
SspnQ62147 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SspnQ62147 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.81■□□□□ 0.76
SspnQ62147 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SspnQ62147 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms