Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Foxc2Q61850 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxc2Q61850 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxc2Q61850 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Foxc2Q61850 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Foxc2Q61850 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Foxc2Q61850 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Foxc2Q61850 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Foxc2Q61850 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxc2Q61850 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxc2Q61850 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
Foxc2Q61850 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.9■□□□□ 0.62
Foxc2Q61850 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Foxc2Q61850 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxc2Q61850 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Foxc2Q61850 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.88■□□□□ 0.61
Foxc2Q61850 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.88■□□□□ 0.61
Foxc2Q61850 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Foxc2Q61850 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxc2Q61850 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Foxc2Q61850 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.87■□□□□ 0.61
Foxc2Q61850 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Foxc2Q61850 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Foxc2Q61850 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxc2Q61850 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxc2Q61850 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxc2Q61850 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Foxc2Q61850 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.85■□□□□ 0.61
Foxc2Q61850 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxc2Q61850 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxc2Q61850 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Foxc2Q61850 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxc2Q61850 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxc2Q61850 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Foxc2Q61850 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.82■□□□□ 0.6
Foxc2Q61850 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Foxc2Q61850 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxc2Q61850 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Foxc2Q61850 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Foxc2Q61850 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxc2Q61850 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Foxc2Q61850 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Foxc2Q61850 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Foxc2Q61850 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxc2Q61850 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Foxc2Q61850 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Foxc2Q61850 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxc2Q61850 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxc2Q61850 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxc2Q61850 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxc2Q61850 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxc2Q61850 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.75■□□□□ 0.59
Foxc2Q61850 Amer2-203ENSMUST00000225247 2662 ntBASIC18.75■□□□□ 0.59
Foxc2Q61850 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.75■□□□□ 0.59
Foxc2Q61850 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxc2Q61850 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxc2Q61850 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Foxc2Q61850 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxc2Q61850 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxc2Q61850 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.72■□□□□ 0.59
Foxc2Q61850 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxc2Q61850 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxc2Q61850 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Foxc2Q61850 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.71■□□□□ 0.59
Foxc2Q61850 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.71■□□□□ 0.59
Foxc2Q61850 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxc2Q61850 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Foxc2Q61850 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Foxc2Q61850 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.69■□□□□ 0.58
Foxc2Q61850 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxc2Q61850 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Foxc2Q61850 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.68■□□□□ 0.58
Foxc2Q61850 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxc2Q61850 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Foxc2Q61850 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Foxc2Q61850 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxc2Q61850 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxc2Q61850 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.67■□□□□ 0.58
Foxc2Q61850 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Foxc2Q61850 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.67■□□□□ 0.58
Foxc2Q61850 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxc2Q61850 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxc2Q61850 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxc2Q61850 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Foxc2Q61850 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxc2Q61850 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Foxc2Q61850 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Foxc2Q61850 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxc2Q61850 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxc2Q61850 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Foxc2Q61850 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxc2Q61850 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Foxc2Q61850 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxc2Q61850 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Foxc2Q61850 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxc2Q61850 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxc2Q61850 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.62■□□□□ 0.57
Foxc2Q61850 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.62■□□□□ 0.57
Foxc2Q61850 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxc2Q61850 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms