Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
Ptch1Q61115 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC36.92■■■■□ 3.5
Ptch1Q61115 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC36.92■■■■□ 3.5
Ptch1Q61115 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
Ptch1Q61115 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
Ptch1Q61115 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Ptch1Q61115 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
Ptch1Q61115 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Ptch1Q61115 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Ptch1Q61115 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC36.86■■■■□ 3.49
Ptch1Q61115 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC36.85■■■■□ 3.49
Ptch1Q61115 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Ptch1Q61115 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
Ptch1Q61115 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
Ptch1Q61115 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC36.83■■■■□ 3.49
Ptch1Q61115 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC36.81■■■■□ 3.48
Ptch1Q61115 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
Ptch1Q61115 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
Ptch1Q61115 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC36.79■■■■□ 3.48
Ptch1Q61115 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC36.78■■■■□ 3.48
Ptch1Q61115 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC36.77■■■■□ 3.48
Ptch1Q61115 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC36.76■■■■□ 3.48
Ptch1Q61115 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC36.76■■■■□ 3.47
Ptch1Q61115 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC36.76■■■■□ 3.47
Ptch1Q61115 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC36.76■■■■□ 3.47
Ptch1Q61115 AC131739.1-201ENSMUST00000221692 1245 ntBASIC36.74■■■■□ 3.47
Ptch1Q61115 Gm6345-201ENSMUST00000180378 1691 ntBASIC36.73■■■■□ 3.47
Ptch1Q61115 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
Ptch1Q61115 Gm6311-201ENSMUST00000073790 878 ntBASIC36.73■■■■□ 3.47
Ptch1Q61115 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
Ptch1Q61115 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Ptch1Q61115 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
Ptch1Q61115 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC36.69■■■■□ 3.46
Ptch1Q61115 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC36.68■■■■□ 3.46
Ptch1Q61115 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC36.68■■■■□ 3.46
Ptch1Q61115 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC36.68■■■■□ 3.46
Ptch1Q61115 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC36.68■■■■□ 3.46
Ptch1Q61115 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
Ptch1Q61115 AC167019.3-201ENSMUST00000228225 1266 ntBASIC36.68■■■■□ 3.46
Ptch1Q61115 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
Ptch1Q61115 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Ptch1Q61115 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
Ptch1Q61115 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Ptch1Q61115 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
Ptch1Q61115 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
Ptch1Q61115 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC36.6■■■■□ 3.45
Ptch1Q61115 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC36.59■■■■□ 3.45
Ptch1Q61115 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC36.59■■■■□ 3.45
Ptch1Q61115 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC36.57■■■■□ 3.44
Ptch1Q61115 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
Ptch1Q61115 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
Ptch1Q61115 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC36.53■■■■□ 3.44
Ptch1Q61115 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Ptch1Q61115 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
Ptch1Q61115 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC36.51■■■■□ 3.43
Ptch1Q61115 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.43
Ptch1Q61115 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC36.49■■■■□ 3.43
Ptch1Q61115 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
Ptch1Q61115 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC36.48■■■■□ 3.43
Ptch1Q61115 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Ptch1Q61115 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Ptch1Q61115 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC36.46■■■■□ 3.43
Ptch1Q61115 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
Ptch1Q61115 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC36.44■■■■□ 3.42
Ptch1Q61115 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC36.44■■■■□ 3.42
Ptch1Q61115 Gm2415-204ENSMUST00000190235 2004 ntBASIC36.43■■■■□ 3.42
Ptch1Q61115 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
Ptch1Q61115 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
Ptch1Q61115 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC36.42■■■■□ 3.42
Ptch1Q61115 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Ptch1Q61115 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
Ptch1Q61115 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
Ptch1Q61115 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
Ptch1Q61115 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC36.36■■■■□ 3.41
Ptch1Q61115 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
Ptch1Q61115 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
Ptch1Q61115 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
Ptch1Q61115 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC36.35■■■■□ 3.41
Ptch1Q61115 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
Ptch1Q61115 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
Ptch1Q61115 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC36.34■■■■□ 3.41
Ptch1Q61115 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
Ptch1Q61115 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
Ptch1Q61115 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
Ptch1Q61115 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
Ptch1Q61115 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC36.32■■■■□ 3.41
Ptch1Q61115 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.41
Ptch1Q61115 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC36.32■■■■□ 3.4
Ptch1Q61115 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Ptch1Q61115 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Ptch1Q61115 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
Ptch1Q61115 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC36.29■■■■□ 3.4
Ptch1Q61115 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC36.28■■■■□ 3.4
Ptch1Q61115 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Ptch1Q61115 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC36.27■■■■□ 3.4
Ptch1Q61115 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
Ptch1Q61115 Gm12366-201ENSMUST00000121722 873 ntBASIC36.27■■■■□ 3.4
Ptch1Q61115 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC36.27■■■■□ 3.4
Ptch1Q61115 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC36.27■■■■□ 3.4
Ptch1Q61115 Gm5786-201ENSMUST00000085368 882 ntBASIC36.27■■■■□ 3.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms