Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Ddx49Q4FZF3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Ddx49Q4FZF3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.71■■■□□ 2.19
Ddx49Q4FZF3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.71■■■□□ 2.19
Ddx49Q4FZF3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ddx49Q4FZF3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.69■■■□□ 2.18
Ddx49Q4FZF3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
Ddx49Q4FZF3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Ddx49Q4FZF3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Ddx49Q4FZF3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.68■■■□□ 2.18
Ddx49Q4FZF3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.68■■■□□ 2.18
Ddx49Q4FZF3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ddx49Q4FZF3 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.68■■■□□ 2.18
Ddx49Q4FZF3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ddx49Q4FZF3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Ddx49Q4FZF3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.65■■■□□ 2.18
Ddx49Q4FZF3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
Ddx49Q4FZF3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.63■■■□□ 2.17
Ddx49Q4FZF3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ddx49Q4FZF3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.62■■■□□ 2.17
Ddx49Q4FZF3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
Ddx49Q4FZF3 Cap2-205ENSMUST00000225824 1634 ntBASIC28.61■■■□□ 2.17
Ddx49Q4FZF3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ddx49Q4FZF3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Ddx49Q4FZF3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ddx49Q4FZF3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.56■■■□□ 2.16
Ddx49Q4FZF3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.55■■■□□ 2.16
Ddx49Q4FZF3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ddx49Q4FZF3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Ddx49Q4FZF3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ddx49Q4FZF3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Ddx49Q4FZF3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Ddx49Q4FZF3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ddx49Q4FZF3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Ddx49Q4FZF3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ddx49Q4FZF3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Ddx49Q4FZF3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ddx49Q4FZF3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.47■■■□□ 2.15
Ddx49Q4FZF3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ddx49Q4FZF3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.45■■■□□ 2.14
Ddx49Q4FZF3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ddx49Q4FZF3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ddx49Q4FZF3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ddx49Q4FZF3 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.44■■■□□ 2.14
Ddx49Q4FZF3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ddx49Q4FZF3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ddx49Q4FZF3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ddx49Q4FZF3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ddx49Q4FZF3 Gm6311-201ENSMUST00000073790 878 ntBASIC28.42■■■□□ 2.14
Ddx49Q4FZF3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.41■■■□□ 2.14
Ddx49Q4FZF3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ddx49Q4FZF3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ddx49Q4FZF3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Ddx49Q4FZF3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.38■■■□□ 2.13
Ddx49Q4FZF3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
Ddx49Q4FZF3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Ddx49Q4FZF3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ddx49Q4FZF3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ddx49Q4FZF3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ddx49Q4FZF3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Ddx49Q4FZF3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Ddx49Q4FZF3 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.35■■■□□ 2.13
Ddx49Q4FZF3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.35■■■□□ 2.13
Ddx49Q4FZF3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Ddx49Q4FZF3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.34■■■□□ 2.13
Ddx49Q4FZF3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Ddx49Q4FZF3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ddx49Q4FZF3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.33■■■□□ 2.13
Ddx49Q4FZF3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ddx49Q4FZF3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Ddx49Q4FZF3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
Ddx49Q4FZF3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ddx49Q4FZF3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.31■■■□□ 2.12
Ddx49Q4FZF3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.31■■■□□ 2.12
Ddx49Q4FZF3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
Ddx49Q4FZF3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ddx49Q4FZF3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ddx49Q4FZF3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.28■■■□□ 2.12
Ddx49Q4FZF3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.28■■■□□ 2.12
Ddx49Q4FZF3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Ddx49Q4FZF3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Ddx49Q4FZF3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Ddx49Q4FZF3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ddx49Q4FZF3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ddx49Q4FZF3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.26■■■□□ 2.11
Ddx49Q4FZF3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
Ddx49Q4FZF3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ddx49Q4FZF3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ddx49Q4FZF3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
Ddx49Q4FZF3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ddx49Q4FZF3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ddx49Q4FZF3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
Ddx49Q4FZF3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
Ddx49Q4FZF3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ddx49Q4FZF3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Ddx49Q4FZF3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.2■■■□□ 2.1
Ddx49Q4FZF3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Ddx49Q4FZF3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.19■■■□□ 2.1
Ddx49Q4FZF3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ddx49Q4FZF3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.16■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms