Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc190Q3URK1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc190Q3URK1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccdc190Q3URK1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.01■□□□□ 0.95
Ccdc190Q3URK1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc190Q3URK1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc190Q3URK1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc190Q3URK1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc190Q3URK1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc190Q3URK1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc190Q3URK1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
Ccdc190Q3URK1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc190Q3URK1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc190Q3URK1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc190Q3URK1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc190Q3URK1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc190Q3URK1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc190Q3URK1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc190Q3URK1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc190Q3URK1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc190Q3URK1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc190Q3URK1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc190Q3URK1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc190Q3URK1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc190Q3URK1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc190Q3URK1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc190Q3URK1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc190Q3URK1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc190Q3URK1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ccdc190Q3URK1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ccdc190Q3URK1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc190Q3URK1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc190Q3URK1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc190Q3URK1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc190Q3URK1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.93■□□□□ 0.94
Ccdc190Q3URK1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc190Q3URK1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc190Q3URK1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ccdc190Q3URK1 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.92■□□□□ 0.94
Ccdc190Q3URK1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc190Q3URK1 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.92■□□□□ 0.94
Ccdc190Q3URK1 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.91■□□□□ 0.94
Ccdc190Q3URK1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc190Q3URK1 Gm16148-201ENSMUST00000119653 893 ntBASIC20.91■□□□□ 0.94
Ccdc190Q3URK1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc190Q3URK1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc190Q3URK1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc190Q3URK1 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.9■□□□□ 0.94
Ccdc190Q3URK1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.9■□□□□ 0.94
Ccdc190Q3URK1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc190Q3URK1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc190Q3URK1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ccdc190Q3URK1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc190Q3URK1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.89■□□□□ 0.94
Ccdc190Q3URK1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc190Q3URK1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc190Q3URK1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc190Q3URK1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc190Q3URK1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc190Q3URK1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ccdc190Q3URK1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc190Q3URK1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc190Q3URK1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc190Q3URK1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc190Q3URK1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc190Q3URK1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc190Q3URK1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc190Q3URK1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc190Q3URK1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc190Q3URK1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc190Q3URK1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc190Q3URK1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc190Q3URK1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc190Q3URK1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc190Q3URK1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc190Q3URK1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc190Q3URK1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc190Q3URK1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc190Q3URK1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc190Q3URK1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc190Q3URK1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc190Q3URK1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc190Q3URK1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc190Q3URK1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.79■□□□□ 0.92
Ccdc190Q3URK1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc190Q3URK1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc190Q3URK1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc190Q3URK1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc190Q3URK1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc190Q3URK1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc190Q3URK1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc190Q3URK1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc190Q3URK1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc190Q3URK1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.77■□□□□ 0.91
Ccdc190Q3URK1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc190Q3URK1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc190Q3URK1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc190Q3URK1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc190Q3URK1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc190Q3URK1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms