Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cks1brtQ3UNC9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cks1brtQ3UNC9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cks1brtQ3UNC9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cks1brtQ3UNC9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cks1brtQ3UNC9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cks1brtQ3UNC9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.5■□□□□ 0.39
Cks1brtQ3UNC9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cks1brtQ3UNC9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cks1brtQ3UNC9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cks1brtQ3UNC9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cks1brtQ3UNC9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cks1brtQ3UNC9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cks1brtQ3UNC9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cks1brtQ3UNC9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cks1brtQ3UNC9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cks1brtQ3UNC9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.46■□□□□ 0.39
Cks1brtQ3UNC9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cks1brtQ3UNC9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cks1brtQ3UNC9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cks1brtQ3UNC9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.46■□□□□ 0.38
Cks1brtQ3UNC9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cks1brtQ3UNC9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cks1brtQ3UNC9 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.45■□□□□ 0.38
Cks1brtQ3UNC9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cks1brtQ3UNC9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cks1brtQ3UNC9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.43■□□□□ 0.38
Cks1brtQ3UNC9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cks1brtQ3UNC9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cks1brtQ3UNC9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cks1brtQ3UNC9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cks1brtQ3UNC9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cks1brtQ3UNC9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cks1brtQ3UNC9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cks1brtQ3UNC9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cks1brtQ3UNC9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cks1brtQ3UNC9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cks1brtQ3UNC9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cks1brtQ3UNC9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cks1brtQ3UNC9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cks1brtQ3UNC9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cks1brtQ3UNC9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cks1brtQ3UNC9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cks1brtQ3UNC9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cks1brtQ3UNC9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cks1brtQ3UNC9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cks1brtQ3UNC9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cks1brtQ3UNC9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cks1brtQ3UNC9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cks1brtQ3UNC9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cks1brtQ3UNC9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cks1brtQ3UNC9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cks1brtQ3UNC9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cks1brtQ3UNC9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cks1brtQ3UNC9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Cks1brtQ3UNC9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.35■□□□□ 0.37
Cks1brtQ3UNC9 Mipep-204ENSMUST00000225043 1548 ntBASIC17.34■□□□□ 0.37
Cks1brtQ3UNC9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cks1brtQ3UNC9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cks1brtQ3UNC9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cks1brtQ3UNC9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cks1brtQ3UNC9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cks1brtQ3UNC9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cks1brtQ3UNC9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cks1brtQ3UNC9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cks1brtQ3UNC9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Cks1brtQ3UNC9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cks1brtQ3UNC9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cks1brtQ3UNC9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cks1brtQ3UNC9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cks1brtQ3UNC9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cks1brtQ3UNC9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cks1brtQ3UNC9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cks1brtQ3UNC9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cks1brtQ3UNC9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cks1brtQ3UNC9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cks1brtQ3UNC9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cks1brtQ3UNC9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cks1brtQ3UNC9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cks1brtQ3UNC9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.28■□□□□ 0.36
Cks1brtQ3UNC9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cks1brtQ3UNC9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cks1brtQ3UNC9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cks1brtQ3UNC9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cks1brtQ3UNC9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cks1brtQ3UNC9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cks1brtQ3UNC9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cks1brtQ3UNC9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cks1brtQ3UNC9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Cks1brtQ3UNC9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.26■□□□□ 0.35
Cks1brtQ3UNC9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cks1brtQ3UNC9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cks1brtQ3UNC9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cks1brtQ3UNC9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cks1brtQ3UNC9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cks1brtQ3UNC9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cks1brtQ3UNC9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cks1brtQ3UNC9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Cks1brtQ3UNC9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cks1brtQ3UNC9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms