Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Rapgef1Q3UHC1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Rapgef1Q3UHC1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rapgef1Q3UHC1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rapgef1Q3UHC1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Rapgef1Q3UHC1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Rapgef1Q3UHC1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.44■■□□□ 1.82
Rapgef1Q3UHC1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rapgef1Q3UHC1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rapgef1Q3UHC1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rapgef1Q3UHC1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rapgef1Q3UHC1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rapgef1Q3UHC1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rapgef1Q3UHC1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.42■■□□□ 1.82
Rapgef1Q3UHC1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Rapgef1Q3UHC1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rapgef1Q3UHC1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rapgef1Q3UHC1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rapgef1Q3UHC1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rapgef1Q3UHC1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rapgef1Q3UHC1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Rapgef1Q3UHC1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.39■■□□□ 1.82
Rapgef1Q3UHC1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Rapgef1Q3UHC1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Rapgef1Q3UHC1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.38■■□□□ 1.81
Rapgef1Q3UHC1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.38■■□□□ 1.81
Rapgef1Q3UHC1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rapgef1Q3UHC1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rapgef1Q3UHC1 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.35■■□□□ 1.81
Rapgef1Q3UHC1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rapgef1Q3UHC1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rapgef1Q3UHC1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rapgef1Q3UHC1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rapgef1Q3UHC1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rapgef1Q3UHC1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rapgef1Q3UHC1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
Rapgef1Q3UHC1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Rapgef1Q3UHC1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rapgef1Q3UHC1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rapgef1Q3UHC1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Rapgef1Q3UHC1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rapgef1Q3UHC1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rapgef1Q3UHC1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rapgef1Q3UHC1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rapgef1Q3UHC1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.28■■□□□ 1.8
Rapgef1Q3UHC1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rapgef1Q3UHC1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rapgef1Q3UHC1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Rapgef1Q3UHC1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.27■■□□□ 1.8
Rapgef1Q3UHC1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.27■■□□□ 1.8
Rapgef1Q3UHC1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rapgef1Q3UHC1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rapgef1Q3UHC1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rapgef1Q3UHC1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rapgef1Q3UHC1 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.26■■□□□ 1.79
Rapgef1Q3UHC1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Rapgef1Q3UHC1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.23■■□□□ 1.79
Rapgef1Q3UHC1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rapgef1Q3UHC1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.19■■□□□ 1.78
Rapgef1Q3UHC1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rapgef1Q3UHC1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rapgef1Q3UHC1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Rapgef1Q3UHC1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rapgef1Q3UHC1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Rapgef1Q3UHC1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rapgef1Q3UHC1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rapgef1Q3UHC1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rapgef1Q3UHC1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.17■■□□□ 1.78
Rapgef1Q3UHC1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Rapgef1Q3UHC1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Rapgef1Q3UHC1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rapgef1Q3UHC1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rapgef1Q3UHC1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Rapgef1Q3UHC1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Rapgef1Q3UHC1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rapgef1Q3UHC1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.13■■□□□ 1.77
Rapgef1Q3UHC1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
Rapgef1Q3UHC1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rapgef1Q3UHC1 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.11■■□□□ 1.77
Rapgef1Q3UHC1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rapgef1Q3UHC1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rapgef1Q3UHC1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rapgef1Q3UHC1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Rapgef1Q3UHC1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Rapgef1Q3UHC1 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.08■■□□□ 1.76
Rapgef1Q3UHC1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rapgef1Q3UHC1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rapgef1Q3UHC1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Rapgef1Q3UHC1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.06■■□□□ 1.76
Rapgef1Q3UHC1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Rapgef1Q3UHC1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rapgef1Q3UHC1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Rapgef1Q3UHC1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rapgef1Q3UHC1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rapgef1Q3UHC1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rapgef1Q3UHC1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rapgef1Q3UHC1 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.03■■□□□ 1.76
Rapgef1Q3UHC1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rapgef1Q3UHC1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rapgef1Q3UHC1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms