Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Gm11175-201ENSMUST00000116172 543 ntBASIC20.35■□□□□ 0.85
Tmem88bQ3TYP4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem88bQ3TYP4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem88bQ3TYP4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem88bQ3TYP4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem88bQ3TYP4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Tmem88bQ3TYP4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.32■□□□□ 0.84
Tmem88bQ3TYP4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Tmem88bQ3TYP4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.31■□□□□ 0.84
Tmem88bQ3TYP4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem88bQ3TYP4 Cap2-205ENSMUST00000225824 1634 ntBASIC20.31■□□□□ 0.84
Tmem88bQ3TYP4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmem88bQ3TYP4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tmem88bQ3TYP4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tmem88bQ3TYP4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tmem88bQ3TYP4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmem88bQ3TYP4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmem88bQ3TYP4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.27■□□□□ 0.84
Tmem88bQ3TYP4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tmem88bQ3TYP4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tmem88bQ3TYP4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Tmem88bQ3TYP4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmem88bQ3TYP4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.25■□□□□ 0.83
Tmem88bQ3TYP4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.25■□□□□ 0.83
Tmem88bQ3TYP4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmem88bQ3TYP4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmem88bQ3TYP4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.24■□□□□ 0.83
Tmem88bQ3TYP4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.24■□□□□ 0.83
Tmem88bQ3TYP4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmem88bQ3TYP4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.22■□□□□ 0.83
Tmem88bQ3TYP4 Gm6311-201ENSMUST00000073790 878 ntBASIC20.22■□□□□ 0.83
Tmem88bQ3TYP4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tmem88bQ3TYP4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Tmem88bQ3TYP4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tmem88bQ3TYP4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.21■□□□□ 0.83
Tmem88bQ3TYP4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmem88bQ3TYP4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Tmem88bQ3TYP4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmem88bQ3TYP4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.19■□□□□ 0.82
Tmem88bQ3TYP4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmem88bQ3TYP4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tmem88bQ3TYP4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tmem88bQ3TYP4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Tmem88bQ3TYP4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmem88bQ3TYP4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmem88bQ3TYP4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmem88bQ3TYP4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.16■□□□□ 0.82
Tmem88bQ3TYP4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.16■□□□□ 0.82
Tmem88bQ3TYP4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmem88bQ3TYP4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmem88bQ3TYP4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmem88bQ3TYP4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmem88bQ3TYP4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Tmem88bQ3TYP4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmem88bQ3TYP4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tmem88bQ3TYP4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.13■□□□□ 0.81
Tmem88bQ3TYP4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tmem88bQ3TYP4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.12■□□□□ 0.81
Tmem88bQ3TYP4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.12■□□□□ 0.81
Tmem88bQ3TYP4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tmem88bQ3TYP4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tmem88bQ3TYP4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.11■□□□□ 0.81
Tmem88bQ3TYP4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.11■□□□□ 0.81
Tmem88bQ3TYP4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Tmem88bQ3TYP4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Tmem88bQ3TYP4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tmem88bQ3TYP4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.09■□□□□ 0.81
Tmem88bQ3TYP4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tmem88bQ3TYP4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tmem88bQ3TYP4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tmem88bQ3TYP4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tmem88bQ3TYP4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.06■□□□□ 0.8
Tmem88bQ3TYP4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Tmem88bQ3TYP4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tmem88bQ3TYP4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.05■□□□□ 0.8
Tmem88bQ3TYP4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tmem88bQ3TYP4 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.04■□□□□ 0.8
Tmem88bQ3TYP4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.04■□□□□ 0.8
Tmem88bQ3TYP4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tmem88bQ3TYP4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tmem88bQ3TYP4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tmem88bQ3TYP4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tmem88bQ3TYP4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Tmem88bQ3TYP4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Tmem88bQ3TYP4 Particl-201ENSMUST00000205370 1560 ntBASIC20.01■□□□□ 0.79
Tmem88bQ3TYP4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tmem88bQ3TYP4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tmem88bQ3TYP4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20■□□□□ 0.79
Tmem88bQ3TYP4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20■□□□□ 0.79
Tmem88bQ3TYP4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tmem88bQ3TYP4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tmem88bQ3TYP4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tmem88bQ3TYP4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tmem88bQ3TYP4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tmem88bQ3TYP4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.97■□□□□ 0.79
Tmem88bQ3TYP4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tmem88bQ3TYP4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tmem88bQ3TYP4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tmem88bQ3TYP4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tmem88bQ3TYP4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms