Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fndc4Q3TR08 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.42■□□□□ 0.86
Fndc4Q3TR08 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fndc4Q3TR08 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Fndc4Q3TR08 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fndc4Q3TR08 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Fndc4Q3TR08 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Fndc4Q3TR08 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Fndc4Q3TR08 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Fndc4Q3TR08 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Fndc4Q3TR08 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Fndc4Q3TR08 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Fndc4Q3TR08 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Fndc4Q3TR08 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.38■□□□□ 0.85
Fndc4Q3TR08 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Fndc4Q3TR08 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fndc4Q3TR08 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fndc4Q3TR08 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Fndc4Q3TR08 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Fndc4Q3TR08 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fndc4Q3TR08 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fndc4Q3TR08 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Fndc4Q3TR08 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.33■□□□□ 0.85
Fndc4Q3TR08 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Fndc4Q3TR08 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fndc4Q3TR08 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fndc4Q3TR08 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fndc4Q3TR08 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.32■□□□□ 0.84
Fndc4Q3TR08 Zfp131-205ENSMUST00000223812 663 ntBASIC20.32■□□□□ 0.84
Fndc4Q3TR08 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fndc4Q3TR08 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fndc4Q3TR08 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fndc4Q3TR08 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fndc4Q3TR08 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fndc4Q3TR08 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fndc4Q3TR08 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Fndc4Q3TR08 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Fndc4Q3TR08 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fndc4Q3TR08 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fndc4Q3TR08 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Fndc4Q3TR08 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fndc4Q3TR08 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Fndc4Q3TR08 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Fndc4Q3TR08 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fndc4Q3TR08 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fndc4Q3TR08 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fndc4Q3TR08 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fndc4Q3TR08 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Fndc4Q3TR08 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fndc4Q3TR08 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Fndc4Q3TR08 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Fndc4Q3TR08 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.26■□□□□ 0.83
Fndc4Q3TR08 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Fndc4Q3TR08 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fndc4Q3TR08 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fndc4Q3TR08 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Fndc4Q3TR08 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fndc4Q3TR08 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fndc4Q3TR08 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fndc4Q3TR08 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Fndc4Q3TR08 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fndc4Q3TR08 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fndc4Q3TR08 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Fndc4Q3TR08 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Fndc4Q3TR08 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fndc4Q3TR08 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fndc4Q3TR08 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fndc4Q3TR08 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fndc4Q3TR08 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fndc4Q3TR08 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fndc4Q3TR08 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
Fndc4Q3TR08 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fndc4Q3TR08 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fndc4Q3TR08 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.2■□□□□ 0.82
Fndc4Q3TR08 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Fndc4Q3TR08 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fndc4Q3TR08 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fndc4Q3TR08 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Fndc4Q3TR08 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Fndc4Q3TR08 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Fndc4Q3TR08 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.18■□□□□ 0.82
Fndc4Q3TR08 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fndc4Q3TR08 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.17■□□□□ 0.82
Fndc4Q3TR08 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fndc4Q3TR08 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fndc4Q3TR08 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fndc4Q3TR08 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Fndc4Q3TR08 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fndc4Q3TR08 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Fndc4Q3TR08 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fndc4Q3TR08 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Fndc4Q3TR08 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Fndc4Q3TR08 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Fndc4Q3TR08 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Fndc4Q3TR08 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fndc4Q3TR08 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.13■□□□□ 0.81
Fndc4Q3TR08 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.13■□□□□ 0.81
Fndc4Q3TR08 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fndc4Q3TR08 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fndc4Q3TR08 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms