Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rab4aP56371 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab4aP56371 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rab4aP56371 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab4aP56371 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rab4aP56371 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab4aP56371 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab4aP56371 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab4aP56371 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab4aP56371 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab4aP56371 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.01■□□□□ 0.63
Rab4aP56371 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Rab4aP56371 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rab4aP56371 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19■□□□□ 0.63
Rab4aP56371 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab4aP56371 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab4aP56371 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab4aP56371 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rab4aP56371 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rab4aP56371 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.99■□□□□ 0.63
Rab4aP56371 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab4aP56371 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab4aP56371 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab4aP56371 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab4aP56371 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab4aP56371 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rab4aP56371 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab4aP56371 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.95■□□□□ 0.62
Rab4aP56371 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab4aP56371 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab4aP56371 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.95■□□□□ 0.62
Rab4aP56371 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab4aP56371 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rab4aP56371 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab4aP56371 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Rab4aP56371 Gm25238-201ENSMUST00000174914 89 ntBASIC18.93■□□□□ 0.62
Rab4aP56371 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab4aP56371 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rab4aP56371 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab4aP56371 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab4aP56371 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab4aP56371 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Rab4aP56371 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab4aP56371 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab4aP56371 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rab4aP56371 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab4aP56371 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab4aP56371 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab4aP56371 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab4aP56371 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rab4aP56371 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab4aP56371 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rab4aP56371 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Rab4aP56371 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab4aP56371 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Rab4aP56371 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rab4aP56371 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab4aP56371 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rab4aP56371 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab4aP56371 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Rab4aP56371 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rab4aP56371 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab4aP56371 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab4aP56371 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab4aP56371 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rab4aP56371 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab4aP56371 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Rab4aP56371 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Rab4aP56371 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab4aP56371 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab4aP56371 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab4aP56371 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rab4aP56371 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.82■□□□□ 0.6
Rab4aP56371 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rab4aP56371 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab4aP56371 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.81■□□□□ 0.6
Rab4aP56371 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rab4aP56371 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab4aP56371 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab4aP56371 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rab4aP56371 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rab4aP56371 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab4aP56371 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab4aP56371 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rab4aP56371 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rab4aP56371 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rab4aP56371 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rab4aP56371 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.76■□□□□ 0.59
Rab4aP56371 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab4aP56371 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.75■□□□□ 0.59
Rab4aP56371 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab4aP56371 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rab4aP56371 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rab4aP56371 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab4aP56371 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab4aP56371 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.73■□□□□ 0.59
Rab4aP56371 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.73■□□□□ 0.59
Rab4aP56371 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab4aP56371 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab4aP56371 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms