Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.94■■□□□ 1.42
Limk1P53668 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Limk1P53668 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.93■■□□□ 1.42
Limk1P53668 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Limk1P53668 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Limk1P53668 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.92■■□□□ 1.42
Limk1P53668 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.92■■□□□ 1.42
Limk1P53668 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Limk1P53668 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Limk1P53668 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Limk1P53668 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Limk1P53668 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Limk1P53668 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Limk1P53668 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.89■■□□□ 1.41
Limk1P53668 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Limk1P53668 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Limk1P53668 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Limk1P53668 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
Limk1P53668 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Limk1P53668 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Limk1P53668 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Limk1P53668 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Limk1P53668 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Limk1P53668 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.86■■□□□ 1.41
Limk1P53668 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Limk1P53668 Gm6311-201ENSMUST00000073790 878 ntBASIC23.85■■□□□ 1.41
Limk1P53668 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Limk1P53668 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Limk1P53668 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Limk1P53668 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.84■■□□□ 1.41
Limk1P53668 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Limk1P53668 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Limk1P53668 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Limk1P53668 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Limk1P53668 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.83■■□□□ 1.41
Limk1P53668 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.82■■□□□ 1.4
Limk1P53668 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Limk1P53668 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Limk1P53668 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Limk1P53668 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Limk1P53668 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Limk1P53668 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Limk1P53668 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Limk1P53668 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.78■■□□□ 1.4
Limk1P53668 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.78■■□□□ 1.4
Limk1P53668 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.78■■□□□ 1.4
Limk1P53668 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Limk1P53668 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Limk1P53668 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.75■■□□□ 1.39
Limk1P53668 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Limk1P53668 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Limk1P53668 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.75■■□□□ 1.39
Limk1P53668 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Limk1P53668 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Limk1P53668 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Limk1P53668 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.73■■□□□ 1.39
Limk1P53668 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Limk1P53668 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Limk1P53668 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Limk1P53668 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Limk1P53668 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Limk1P53668 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Limk1P53668 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.69■■□□□ 1.38
Limk1P53668 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.69■■□□□ 1.38
Limk1P53668 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.68■■□□□ 1.38
Limk1P53668 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Limk1P53668 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Limk1P53668 Gm15039-201ENSMUST00000118914 875 ntBASIC23.67■■□□□ 1.38
Limk1P53668 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Limk1P53668 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Limk1P53668 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Limk1P53668 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Limk1P53668 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Limk1P53668 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.66■■□□□ 1.38
Limk1P53668 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Limk1P53668 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Limk1P53668 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Limk1P53668 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.66■■□□□ 1.38
Limk1P53668 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.65■■□□□ 1.38
Limk1P53668 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Limk1P53668 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.65■■□□□ 1.38
Limk1P53668 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Limk1P53668 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Limk1P53668 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Limk1P53668 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.63■■□□□ 1.37
Limk1P53668 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Limk1P53668 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Limk1P53668 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Limk1P53668 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Limk1P53668 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Limk1P53668 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Limk1P53668 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Limk1P53668 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Limk1P53668 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Limk1P53668 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Limk1P53668 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.58■■□□□ 1.37
Limk1P53668 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Limk1P53668 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.57■■□□□ 1.36
Limk1P53668 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Limk1P53668 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms