Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Lbx1P52955 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.4■■□□□ 1.5
Lbx1P52955 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Lbx1P52955 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Lbx1P52955 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.4■■□□□ 1.5
Lbx1P52955 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lbx1P52955 Gm7332-201ENSMUST00000118351 454 ntBASIC24.39■■□□□ 1.49
Lbx1P52955 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Lbx1P52955 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.39■■□□□ 1.49
Lbx1P52955 Gm5812-201ENSMUST00000061073 957 ntBASIC24.38■■□□□ 1.49
Lbx1P52955 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Lbx1P52955 Scarna2-201ENSMUST00000157560 414 ntBASIC24.37■■□□□ 1.49
Lbx1P52955 Gm11687-201ENSMUST00000118911 886 ntBASIC24.36■■□□□ 1.49
Lbx1P52955 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Lbx1P52955 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
Lbx1P52955 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Lbx1P52955 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Lbx1P52955 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lbx1P52955 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.35■■□□□ 1.49
Lbx1P52955 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Lbx1P52955 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lbx1P52955 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Lbx1P52955 Gm4799-201ENSMUST00000095396 657 ntBASIC24.33■■□□□ 1.49
Lbx1P52955 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Lbx1P52955 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lbx1P52955 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Lbx1P52955 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.31■■□□□ 1.48
Lbx1P52955 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Lbx1P52955 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.31■■□□□ 1.48
Lbx1P52955 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lbx1P52955 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.3■■□□□ 1.48
Lbx1P52955 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Lbx1P52955 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lbx1P52955 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Lbx1P52955 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Lbx1P52955 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.26■■□□□ 1.47
Lbx1P52955 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.25■■□□□ 1.47
Lbx1P52955 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Lbx1P52955 Gm5297-201ENSMUST00000198555 1171 ntBASIC24.25■■□□□ 1.47
Lbx1P52955 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Lbx1P52955 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Lbx1P52955 Gm9806-201ENSMUST00000051080 552 ntBASIC24.25■■□□□ 1.47
Lbx1P52955 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
Lbx1P52955 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Lbx1P52955 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.23■■□□□ 1.47
Lbx1P52955 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Lbx1P52955 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.22■■□□□ 1.47
Lbx1P52955 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Lbx1P52955 Gm16437-201ENSMUST00000025669 507 ntBASIC24.2■■□□□ 1.46
Lbx1P52955 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.19■■□□□ 1.46
Lbx1P52955 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.19■■□□□ 1.46
Lbx1P52955 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Lbx1P52955 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Lbx1P52955 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Lbx1P52955 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Lbx1P52955 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Lbx1P52955 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Lbx1P52955 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Lbx1P52955 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Lbx1P52955 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Lbx1P52955 Gm27502-201ENSMUST00000183495 199 ntBASIC24.15■■□□□ 1.46
Lbx1P52955 Gm15546-201ENSMUST00000122095 826 ntBASIC24.14■■□□□ 1.45
Lbx1P52955 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Lbx1P52955 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Lbx1P52955 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.12■■□□□ 1.45
Lbx1P52955 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Lbx1P52955 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.11■■□□□ 1.45
Lbx1P52955 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Lbx1P52955 Serp2-204ENSMUST00000228055 705 ntBASIC24.11■■□□□ 1.45
Lbx1P52955 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
Lbx1P52955 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Lbx1P52955 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Lbx1P52955 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Lbx1P52955 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.1■■□□□ 1.45
Lbx1P52955 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.1■■□□□ 1.45
Lbx1P52955 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.1■■□□□ 1.45
Lbx1P52955 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.1■■□□□ 1.45
Lbx1P52955 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.09■■□□□ 1.45
Lbx1P52955 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Lbx1P52955 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Lbx1P52955 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Lbx1P52955 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Lbx1P52955 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Lbx1P52955 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Lbx1P52955 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Lbx1P52955 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Lbx1P52955 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Lbx1P52955 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Lbx1P52955 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Lbx1P52955 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Lbx1P52955 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Lbx1P52955 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.04■■□□□ 1.44
Lbx1P52955 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24■■□□□ 1.43
Lbx1P52955 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24■■□□□ 1.43
Lbx1P52955 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Lbx1P52955 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Lbx1P52955 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Lbx1P52955 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Lbx1P52955 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Lbx1P52955 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.96■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 139 ms