Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hist1h1aP43275 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hist1h1aP43275 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hist1h1aP43275 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.8■□□□□ 0.76
Hist1h1aP43275 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Hist1h1aP43275 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hist1h1aP43275 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hist1h1aP43275 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hist1h1aP43275 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hist1h1aP43275 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hist1h1aP43275 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hist1h1aP43275 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hist1h1aP43275 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.78■□□□□ 0.76
Hist1h1aP43275 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hist1h1aP43275 Gm16148-201ENSMUST00000119653 893 ntBASIC19.78■□□□□ 0.76
Hist1h1aP43275 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hist1h1aP43275 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hist1h1aP43275 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Hist1h1aP43275 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hist1h1aP43275 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hist1h1aP43275 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hist1h1aP43275 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hist1h1aP43275 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hist1h1aP43275 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.74■□□□□ 0.75
Hist1h1aP43275 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hist1h1aP43275 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Hist1h1aP43275 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hist1h1aP43275 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hist1h1aP43275 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hist1h1aP43275 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hist1h1aP43275 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hist1h1aP43275 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hist1h1aP43275 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hist1h1aP43275 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.72■□□□□ 0.75
Hist1h1aP43275 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hist1h1aP43275 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hist1h1aP43275 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hist1h1aP43275 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hist1h1aP43275 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hist1h1aP43275 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hist1h1aP43275 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hist1h1aP43275 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hist1h1aP43275 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hist1h1aP43275 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hist1h1aP43275 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.69■□□□□ 0.74
Hist1h1aP43275 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.69■□□□□ 0.74
Hist1h1aP43275 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hist1h1aP43275 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Hist1h1aP43275 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hist1h1aP43275 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hist1h1aP43275 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Hist1h1aP43275 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hist1h1aP43275 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hist1h1aP43275 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hist1h1aP43275 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hist1h1aP43275 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hist1h1aP43275 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hist1h1aP43275 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hist1h1aP43275 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hist1h1aP43275 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Hist1h1aP43275 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hist1h1aP43275 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hist1h1aP43275 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Hist1h1aP43275 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hist1h1aP43275 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h1aP43275 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h1aP43275 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hist1h1aP43275 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hist1h1aP43275 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.6■□□□□ 0.73
Hist1h1aP43275 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Hist1h1aP43275 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hist1h1aP43275 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hist1h1aP43275 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hist1h1aP43275 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hist1h1aP43275 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hist1h1aP43275 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hist1h1aP43275 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hist1h1aP43275 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hist1h1aP43275 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hist1h1aP43275 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hist1h1aP43275 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Hist1h1aP43275 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hist1h1aP43275 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hist1h1aP43275 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hist1h1aP43275 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hist1h1aP43275 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hist1h1aP43275 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h1aP43275 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
Hist1h1aP43275 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.55■□□□□ 0.72
Hist1h1aP43275 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hist1h1aP43275 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hist1h1aP43275 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hist1h1aP43275 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hist1h1aP43275 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hist1h1aP43275 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hist1h1aP43275 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Hist1h1aP43275 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hist1h1aP43275 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hist1h1aP43275 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hist1h1aP43275 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms