Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf1aP25118 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.22■□□□□ 0.83
Tnfrsf1aP25118 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf1aP25118 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tnfrsf1aP25118 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Tnfrsf1aP25118 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf1aP25118 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.2■□□□□ 0.82
Tnfrsf1aP25118 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf1aP25118 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf1aP25118 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf1aP25118 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf1aP25118 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1aP25118 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1aP25118 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1aP25118 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1aP25118 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1aP25118 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf1aP25118 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf1aP25118 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.17■□□□□ 0.82
Tnfrsf1aP25118 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf1aP25118 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf1aP25118 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf1aP25118 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf1aP25118 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.15■□□□□ 0.82
Tnfrsf1aP25118 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf1aP25118 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf1aP25118 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf1aP25118 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf1aP25118 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf1aP25118 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf1aP25118 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf1aP25118 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf1aP25118 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf1aP25118 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf1aP25118 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.1■□□□□ 0.81
Tnfrsf1aP25118 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf1aP25118 Zfp131-205ENSMUST00000223812 663 ntBASIC20.1■□□□□ 0.81
Tnfrsf1aP25118 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Tnfrsf1aP25118 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf1aP25118 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfrsf1aP25118 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfrsf1aP25118 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tnfrsf1aP25118 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tnfrsf1aP25118 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.07■□□□□ 0.8
Tnfrsf1aP25118 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.06■□□□□ 0.8
Tnfrsf1aP25118 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf1aP25118 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf1aP25118 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf1aP25118 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf1aP25118 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf1aP25118 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf1aP25118 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf1aP25118 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf1aP25118 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf1aP25118 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.04■□□□□ 0.8
Tnfrsf1aP25118 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.04■□□□□ 0.8
Tnfrsf1aP25118 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Tnfrsf1aP25118 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Tnfrsf1aP25118 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.03■□□□□ 0.8
Tnfrsf1aP25118 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf1aP25118 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfrsf1aP25118 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfrsf1aP25118 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Tnfrsf1aP25118 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf1aP25118 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20■□□□□ 0.79
Tnfrsf1aP25118 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf1aP25118 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.98■□□□□ 0.79
Tnfrsf1aP25118 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.98■□□□□ 0.79
Tnfrsf1aP25118 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.98■□□□□ 0.79
Tnfrsf1aP25118 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfrsf1aP25118 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfrsf1aP25118 Gm9397-201ENSMUST00000200125 605 ntBASIC19.97■□□□□ 0.79
Tnfrsf1aP25118 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfrsf1aP25118 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfrsf1aP25118 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf1aP25118 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Tnfrsf1aP25118 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Tnfrsf1aP25118 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.96■□□□□ 0.79
Tnfrsf1aP25118 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.96■□□□□ 0.79
Tnfrsf1aP25118 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf1aP25118 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf1aP25118 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.95■□□□□ 0.78
Tnfrsf1aP25118 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.95■□□□□ 0.78
Tnfrsf1aP25118 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.95■□□□□ 0.78
Tnfrsf1aP25118 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Tnfrsf1aP25118 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf1aP25118 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf1aP25118 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Tnfrsf1aP25118 Gm24970-201ENSMUST00000175582 82 ntBASIC19.93■□□□□ 0.78
Tnfrsf1aP25118 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf1aP25118 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf1aP25118 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf1aP25118 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf1aP25118 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Tnfrsf1aP25118 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf1aP25118 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf1aP25118 Gm45855-201ENSMUST00000212546 880 ntBASIC19.9■□□□□ 0.78
Tnfrsf1aP25118 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf1aP25118 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf1aP25118 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms