Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P06328 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P06328 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P06328 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P06328 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
P06328 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P06328 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P06328 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P06328 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
P06328 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P06328 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P06328 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06328 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P06328 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P06328 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
P06328 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P06328 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P06328 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P06328 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
P06328 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P06328 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P06328 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P06328 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
P06328 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
P06328 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.68■□□□□ 0.42
P06328 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
P06328 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.67■□□□□ 0.42
P06328 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
P06328 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.67■□□□□ 0.42
P06328 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P06328 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.65■□□□□ 0.42
P06328 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P06328 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P06328 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.65■□□□□ 0.42
P06328 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P06328 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P06328 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
P06328 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P06328 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P06328 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P06328 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P06328 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P06328 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
P06328 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
P06328 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P06328 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.62■□□□□ 0.41
P06328 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P06328 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
P06328 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
P06328 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
P06328 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
P06328 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06328 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P06328 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06328 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P06328 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06328 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06328 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06328 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
P06328 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
P06328 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06328 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.56■□□□□ 0.4
P06328 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06328 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06328 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06328 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.55■□□□□ 0.4
P06328 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
P06328 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P06328 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
P06328 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P06328 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
P06328 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P06328 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.54■□□□□ 0.4
P06328 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
P06328 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
P06328 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06328 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P06328 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
P06328 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06328 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06328 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06328 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06328 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P06328 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P06328 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
P06328 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
P06328 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P06328 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
P06328 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
P06328 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P06328 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P06328 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.51■□□□□ 0.39
P06328 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
P06328 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P06328 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P06328 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
P06328 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P06328 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P06328 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.49■□□□□ 0.39
P06328 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms