Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01739 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01739 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01739 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01739 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01739 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
P01739 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P01739 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P01739 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P01739 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
P01739 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
P01739 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
P01739 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
P01739 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01739 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01739 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P01739 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.19■□□□□ 0.5
P01739 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P01739 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P01739 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P01739 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
P01739 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
P01739 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
P01739 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P01739 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P01739 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01739 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
P01739 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P01739 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P01739 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P01739 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01739 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
P01739 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.13■□□□□ 0.49
P01739 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01739 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
P01739 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
P01739 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
P01739 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P01739 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01739 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
P01739 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.11■□□□□ 0.49
P01739 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01739 Zfp131-205ENSMUST00000223812 663 ntBASIC18.1■□□□□ 0.49
P01739 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
P01739 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01739 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.08■□□□□ 0.48
P01739 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01739 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
P01739 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.06■□□□□ 0.48
P01739 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.06■□□□□ 0.48
P01739 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.05■□□□□ 0.48
P01739 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01739 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01739 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01739 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
P01739 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P01739 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
P01739 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P01739 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P01739 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
P01739 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
P01739 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P01739 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
P01739 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.02■□□□□ 0.48
P01739 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.02■□□□□ 0.48
P01739 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
P01739 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.01■□□□□ 0.47
P01739 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.01■□□□□ 0.47
P01739 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01739 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01739 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P01739 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
P01739 AC157572.2-201ENSMUST00000226970 908 ntBASIC18■□□□□ 0.47
P01739 Gm9397-201ENSMUST00000200125 605 ntBASIC17.99■□□□□ 0.47
P01739 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
P01739 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.98■□□□□ 0.47
P01739 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.98■□□□□ 0.47
P01739 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.98■□□□□ 0.47
P01739 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
P01739 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
P01739 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
P01739 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
P01739 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
P01739 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
P01739 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
P01739 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
P01739 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
P01739 Gm24970-201ENSMUST00000175582 82 ntBASIC17.95■□□□□ 0.46
P01739 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
P01739 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
P01739 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
P01739 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
P01739 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.93■□□□□ 0.46
P01739 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
P01739 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P01739 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
P01739 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P01739 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P01739 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P01739 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 154 ms