Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.99■□□□□ 0.31
Sh2d1aO88890 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh2d1aO88890 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh2d1aO88890 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh2d1aO88890 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh2d1aO88890 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh2d1aO88890 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh2d1aO88890 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sh2d1aO88890 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh2d1aO88890 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh2d1aO88890 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sh2d1aO88890 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh2d1aO88890 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh2d1aO88890 Zfp131-205ENSMUST00000223812 663 ntBASIC16.97■□□□□ 0.31
Sh2d1aO88890 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.96■□□□□ 0.31
Sh2d1aO88890 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh2d1aO88890 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh2d1aO88890 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.95■□□□□ 0.3
Sh2d1aO88890 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh2d1aO88890 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sh2d1aO88890 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh2d1aO88890 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh2d1aO88890 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d1aO88890 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d1aO88890 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d1aO88890 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d1aO88890 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh2d1aO88890 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.93■□□□□ 0.3
Sh2d1aO88890 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh2d1aO88890 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.92■□□□□ 0.3
Sh2d1aO88890 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh2d1aO88890 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh2d1aO88890 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d1aO88890 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.9■□□□□ 0.3
Sh2d1aO88890 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d1aO88890 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sh2d1aO88890 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.89■□□□□ 0.29
Sh2d1aO88890 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.87■□□□□ 0.29
Sh2d1aO88890 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh2d1aO88890 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.87■□□□□ 0.29
Sh2d1aO88890 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh2d1aO88890 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sh2d1aO88890 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh2d1aO88890 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sh2d1aO88890 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh2d1aO88890 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.85■□□□□ 0.29
Sh2d1aO88890 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Sh2d1aO88890 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sh2d1aO88890 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.85■□□□□ 0.29
Sh2d1aO88890 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Sh2d1aO88890 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh2d1aO88890 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh2d1aO88890 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh2d1aO88890 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh2d1aO88890 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.84■□□□□ 0.29
Sh2d1aO88890 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.84■□□□□ 0.29
Sh2d1aO88890 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh2d1aO88890 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d1aO88890 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.83■□□□□ 0.28
Sh2d1aO88890 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d1aO88890 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d1aO88890 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d1aO88890 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d1aO88890 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d1aO88890 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d1aO88890 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d1aO88890 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sh2d1aO88890 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC16.81■□□□□ 0.28
Sh2d1aO88890 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d1aO88890 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d1aO88890 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d1aO88890 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d1aO88890 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d1aO88890 Gm9397-201ENSMUST00000200125 605 ntBASIC16.8■□□□□ 0.28
Sh2d1aO88890 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d1aO88890 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d1aO88890 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Sh2d1aO88890 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1aO88890 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1aO88890 Gm45855-201ENSMUST00000212546 880 ntBASIC16.79■□□□□ 0.28
Sh2d1aO88890 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1aO88890 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sh2d1aO88890 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d1aO88890 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Sh2d1aO88890 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.78■□□□□ 0.28
Sh2d1aO88890 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d1aO88890 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh2d1aO88890 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh2d1aO88890 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d1aO88890 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.76■□□□□ 0.27
Sh2d1aO88890 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d1aO88890 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d1aO88890 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh2d1aO88890 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sh2d1aO88890 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.75■□□□□ 0.27
Sh2d1aO88890 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.75■□□□□ 0.27
Sh2d1aO88890 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Sh2d1aO88890 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d1aO88890 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d1aO88890 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms